Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3463 ATGGATGAGAATGGTGAAAGGCGTGTGATGTTGTTTGGCGTGAACATCGCAGCAAAACGTGCTAAAGTCAATGATTCCGTGAACGATAGTTTCAACACTGAGGATGATAATCAGAATGAGATGGAGATTTGTTCTTTTGATAAACCGGAGGATGAAAGTGATGATGAGAAGAATGAAAATCCAGATTCTGGTCAAAGTTCTAACCAGGAAAACCGAAAAAAAGTGAAACAATGGACAAAGAATGAACACAAGGCGTTTTTGGTAGGTTTACAAACTGCTGGGAGAGGTAAATGGAAGGATATATCAAGGAACTATGTCAAGACCAAGACTTCTACTCAAGTTGCCAGTCATGCTCAAAAGTTTTTTCTCAGACGAAGAAGTTTAGATAAAACTAAACGCCAGAGCGTCTTCGATATGATGCTTGATTATGAAGATTCAGAAACTCCGAGTCCTTCTCCTTCGCGGAAACCATCCCCCAGCAACTCTATTTAG 492 0.4024 MDENGERRVMLFGVNIAAKRAKVNDSVNDSFNTEDDNQNEMEICSFDKPEDESDDEKNENPDSGQSSNQENRKKVKQWTKNEHKAFLVGLQTAGRGKWKDISRNYVKTKTSTQVASHAQKFFLRRRSLDKTKRQSVFDMMLDYEDSETPSPSPSRKPSPSNSI* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3463 163 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 74 124 IPR006447 GO:0003677
Psa3g3463 163 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 126 IPR017930 -
Psa3g3463 163 MobiDBLite consensus disorder prediction 25 39 - -
Psa3g3463 163 CDD SANT 78 122 IPR001005 -
Psa3g3463 163 SUPERFAMILY Homeodomain-like 72 127 IPR009057 -
Psa3g3463 163 MobiDBLite consensus disorder prediction 141 163 - -
Psa3g3463 163 ProSiteProfiles Myb-like domain profile. 70 122 IPR001005 -
Psa3g3463 163 MobiDBLite consensus disorder prediction 147 163 - -
Psa3g3463 163 PANTHER TRANSCRIPTION FACTOR KUA1 9 155 - -
Psa3g3463 163 MobiDBLite consensus disorder prediction 22 80 - -
Psa3g3463 163 ProSiteProfiles SANT domain profile. 76 126 IPR017884 -
Psa3g3463 163 SMART sant 74 124 IPR001005 -
Psa3g3463 163 Gene3D - 76 128 - -
Psa3g3463 163 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3463 Psa-Chr3 292365456 292366273 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa3g3463 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3463 - - ini:109150905 106.686