Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3450 ATGAAGCAGGGAGTGCTAACCCCTGGCCGTGTTAGACTTTTGCTTCACAGGGGAACTCCTTGCTTTCGAGGACACGGAAGGCGTAATGGAGAGCGCAGAAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTCTGAACTTGGTAATAGTGAAGAAGGGTGAGAATGATTTACCTGGCCTGACTGATGTTGAGAAGCCAAGGATGAGAGGTCCCAAGAGAGCCTCCAAAATCCGTAAGCTGTTCAACCTGTCTAAGGAGGATGATGTGAGGAAGTATGTCAACACCTACCGCCGAACATTTACAACAAAAGCTGGGAAAAAGCAGAGCAAAGCTCCCAAGATTCAACGTCTGGTTACTCCTCTCACTCTCCAAAGAAAACGAGCAAGAATTGCAGATAAGAAGAAGAGAATTGCTAAGGCAAAATCAGAGGCGGCTGATTACCAGAAGCTTCTTGCTTCAAGGTTGAAGGAGCAGAGGGAGCGCCGCAGTGAGAGTTTAGCCAAAAAGAGATCTAGGATTTCTACTGCTACCAAGGCAACTGTCCCTGCATAG 564 0.4823 MKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKQSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAADYQKLLASRLKEQRERRSESLAKKRSRISTATKATVPA* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3450 187 PANTHER 40S RIBOSOMAL PROTEIN S6 1 185 IPR001377 GO:0003735|GO:0005840|GO:0006412
Psa3g3450 187 MobiDBLite consensus disorder prediction 158 175 - -
Psa3g3450 187 PANTHER 40S RIBOSOMAL PROTEIN S6 1 185 - -
Psa3g3450 187 SMART Ribosomal_S6e_2 1 66 IPR001377 GO:0003735|GO:0005840|GO:0006412
Psa3g3450 187 Coils Coil 127 154 - -
Psa3g3450 187 Pfam Ribosomal protein S6e 1 66 IPR001377 GO:0003735|GO:0005840|GO:0006412
Psa3g3450 187 Gene3D - 71 172 - -
Psa3g3450 187 MobiDBLite consensus disorder prediction 158 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3450 Psa-Chr3 291528484 291530266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3450 1 180 Cytoplasmic Ribosomal Protein Gene Family AT4G31700 91.667 2.04e-109 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3450 K02991 - atr:18443791 310.842