Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3396 ATGGAGAGGATTCGACTAGTTGAAAAAGTTGTGATTGTTCCAGAAAAACCAACACCTCGTAAACGAATGTTTTTATCAAACATTGACTTGTCACTTGTTGTTTACCAAGATTCTGCCTCTTTCTTTGATCCTCCAAGTAACCAAGTATCTTTCTCAGATATTTGTAGCAAGTTATACAACGCACTTGGTAAAATGCTTGATCATTATGACTTTATGGCCGGCCGGCTCGTGCCGAGTTTAGACGAGAAAAATCGATTTGAAATTGATTGTAACGACGCTGGTATTGTTGTTGCTGCTGCAAAAACTGATAGAAAGTTGTGTGAATTTGGTGTTATTTCAGCACCTAATCCAGAGTTAATGGAATTGGTTGTTTTCTTGCATGAACAAGGTGGTGAAGAAGTTGACCTAAAAGAAATTCCCCTTGCTTCCTTACAGCTGACACAATTTGGATGTGGAAGTTTGGCACTAGCTTCTCATTACAACCACTGCATCCTCGACGGTATAGCAATAAGAGAATTTGAGACGAATTTGGCGTCGCTAACACGCGGCGACGAACTCGTGATAATACCTAACACAGACAGAACAGTCCTGAAAGCTCGGAATCCACCAAAGATAAGCCATCCACATTTTGAATTCTCAAAATCAACAAACATAGAGAATCTATTCACAGCACGAGGTACAACTAGCATCAACGTTAAGAAACCCGTTGTAGAGAATCAAATTCATGTACTTCATTTATCACCACAAAATATTGCAACCCTAAAAAAGAAAGCCCTAGAAAAAACATCCTTAAAAAACATCACAACATTTCAAGTGGTTGCTGCGAAAATCTGGAAAGCGAGAAGCATAGCGACAAAGATCGAAGAAGATAAACTATCAACAATGTTGTTTCCGGTCGATGTTCGAAAAAAGGTTGTCCCCGAACTTCCGATCGGATTCGCAGGAAATGCATTAGTTCCTGGTTTTACAAGATCAACTGTGAAGGAGTTAATTGAACAAGGAGATGATTATGCTATAAGAAAAGTGCAAGAAGGGATTGAGAGATTGAATGATGAGTATATTAAATCGGGTATAGATTGGTTAGAGTTGAACAAAGGTGTGCCTTGTAATGAAGATAGTTTTTCTTTGGTTGCATGGTGGAGATTAGGGTTAGAGAATGAAGTTTTTGCTTGGGGGAGATTGAAGTGTGCTACTCCACTTATTGTTAAGCATGGTTTGGTTATGCTGTTACCAGGAGGAAAAGATGAAGGGGGGATTAATATATGTTTGAGCTTACCTCATGATGAATTGGAAGAATTTTGTAGGATAATGTTGGAAACTTAG 1323 0.3878 MERIRLVEKVVIVPEKPTPRKRMFLSNIDLSLVVYQDSASFFDPPSNQVSFSDICSKLYNALGKMLDHYDFMAGRLVPSLDEKNRFEIDCNDAGIVVAAAKTDRKLCEFGVISAPNPELMELVVFLHEQGGEEVDLKEIPLASLQLTQFGCGSLALASHYNHCILDGIAIREFETNLASLTRGDELVIIPNTDRTVLKARNPPKISHPHFEFSKSTNIENLFTARGTTSINVKKPVVENQIHVLHLSPQNIATLKKKALEKTSLKNITTFQVVAAKIWKARSIATKIEEDKLSTMLFPVDVRKKVVPELPIGFAGNALVPGFTRSTVKELIEQGDDYAIRKVQEGIERLNDEYIKSGIDWLELNKGVPCNEDSFSLVAWWRLGLENEVFAWGRLKCATPLIVKHGLVMLLPGGKDEGGINICLSLPHDELEEFCRIMLET* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3396 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 439 - -
Psa3g3396 440 Pfam Transferase family 5 433 - -
Psa3g3396 440 Gene3D - 228 437 IPR023213 -
Psa3g3396 440 Gene3D - 2 214 IPR023213 -
Psa3g3396 440 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 2 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3396 Psa-Chr3 286672639 286674114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3396 3 439 Monolignol Biosynthesis Gene Families AT5G48930 25.503 4.35e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3396 K15400 - gmx:100801822 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3396 3 286672639 286674114 Psa3g3396 3 286672639 286674114 ECH