Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3369 ATGAGTTTAATCAAGTTCAAAAATTTGATCTCACTTTTCAACTTCATCACATTATTACTACTATGTTGTTCTTCATTCACCACATCATCATCACAACAATCCATGAAAGACAATGAAACTCTAAGCTCAAATAGTGGAAATTTCACCTTAGGATTCTTCACCCCTCAAAACTCCACAAATCGCTATGTAGGAATTTGGTGCAAAACTCAAGACTTTGTTATATGGGTTGCTAACAGAAACCAACCATTGATCAATGATTCTTCTGGAGTTCTTACAATATCCAATGATGGAAATCTTGTTGTATTGAATGGACAAAAAGATGTTACTTGGTCATCAAGTTTGACAAACGCTACATCAAAAACCAATTCTAGTTTCACACTTTCAGATTATGGAAGCCTTGTTTTGTCTGAAACAACAACAGGAAATACAATATGGGAGAGTTTCCAACAGCCTTCAAATGCATTACTACCAAGCATGGAGTTCACAAGTAACATGAAACTTACATCATGGAAAACCCCTTCTGATCCATCGACCGGAAGCTTCTCTCTCAGTATCGAACGGTTGAAGGTTCCAGAAGTTTTCATTTGGAACAGAACTCGGCCGTACTGGCGGAGTGGTCCTTGGAATGGTCAAATCTTTATAGGGGTACAAGACATGAAGATGCTTTATCTTAATGGTTTTCATTTCGAGAAAGACATAAATAGAGGAACGGTTGATTTGAATTTCAGAGCAGACGACTACGGCCTCGTGATCTATGCCTTGAATCCGCAAGGTCAAATGCATGAAAACTCGTGGAGTATTGAGAAGGAGCAATGGATTGATACATGGACTAATCGTAGATCGGATTGCGATGTTTATGGTTTCTGTGGTCCATTTGGAATTTGCAATTCAGAAGGGTCACCAATTTGTAGCTGTTTGGAAGGGTTTGAACAAAGAAACCAACAAGAGTGGAATCAAAAAAATTGGACTAATGGATGTGTTAGGAAGGAACTTTTACAGTGTGAAAATGCCAAAAATCAAAGCAAGAGTTCACAACGTAATGAAGCAGATAGTTTTTTGAAATTGAGTAATGTAAAAGTACCCGATTTTGCAGAACTGTCATCTAATGAACAAGACGAATGCAAAAACCAGTGTTTGATGAATTGCTCTTGTACTGCATATTCGTACGCGACTGATATCGGTTGTATGTCTTGGAACGGAAATCTAACTGATATACAACAATTTCAAACCGGAGGAACTGATCTATACATTCGCGTACCCTATGTCGAACTTGACATATCAGATAAAGGGCATAAAGGAACAATCACCATTGCAGTTTCATTTTCGATAGTTTCGATAGGAATTATCGTTATTGTGATTGTTGCATATTTCATTTGGATAAAGGATTCAAAATCAGAGAGAAAAAAGAAGCTGCATACGATTTTTCGTTTCCACAAAATCGAAAAACCTGAGGAGCACACAAGTGACAATGTTAATGGTGAATTGTCACAAGCTAAGCTACAAGAGCTATTGCTATTTAATTTTGAAAAGCTTGCAACTGCTACAAACAACTTTCATTCATCGAATAAACTTGGACAAGGAGGTTTTGGTCCTGTGTACAAGGGAATACTGCAAGATGGTAAAGAAATAGCGGTTAAGAGACTTTCGATATCATCTGGACAAGGGTTAAAAGAATTCATGAATGAAGTAGTAGTGATTTCTAAGCTTCAACATCGCAACCTTGTAAGGCTTTTAGGCTGTTGTACTGAAAGAAATGAAAAGATGTTGATGTATGAGTTCATGCCAAATGGAAGCTTGGATGCATATATTTTCGATTCATCAAGAAATAAACTCTTGGATTGGGAGAAACGATTCAGCATAATCGAAGGAATCGCTCGTGGACTAGTCTATCTACATAGAGATTCCAGGCTAAAAATCATACATAGAGATTTGAAGGCGAGTAATATCTTACTAGACGAGGAAATGAATCCAAAAATATCGGACTTTGGTATGGCGAGAATCTTTGGAGTGAGTGAAGATCATGCCAACACACAAAGGATTGTCGGAACATACGGTTACATGGCTCCAGAATATGCAATGCAAGGAGTATTTTCGGATAAATCAGACGTCTTCAGCTTTGGAGTTTTGCTGATAGAGATTGTCTGCGGAAGACGAAACTCGAGCTTTTATGAACACGAAAATTCTCTGACTCTCTTAGGATTTGCATGGACTCAATGGAGGGAAGGCAATATTGTATGTTTAATAGAACCAGAAATATATGATCATAATCATCATAAGGAGATTTTGAGGTGCATACATATAGGACTTTTATGTGTACAAGAATCAGCTATAGACAGGCCTACCATGGCGACAGTGATTTCTATGCTTAACAGCGAAATTATGGAAATTCCTCCGGCAAGACAACCTGCATTCTTGCTGATGCAGAACATGATGAATACAGTGTGTTCTGAGGAAAGAAATGAGGTGTATTCCAATAATGCTGTGAGTATTACAGATCTTCATGGAAGATAG 2511 0.3775 MSLIKFKNLISLFNFITLLLLCCSSFTTSSSQQSMKDNETLSSNSGNFTLGFFTPQNSTNRYVGIWCKTQDFVIWVANRNQPLINDSSGVLTISNDGNLVVLNGQKDVTWSSSLTNATSKTNSSFTLSDYGSLVLSETTTGNTIWESFQQPSNALLPSMEFTSNMKLTSWKTPSDPSTGSFSLSIERLKVPEVFIWNRTRPYWRSGPWNGQIFIGVQDMKMLYLNGFHFEKDINRGTVDLNFRADDYGLVIYALNPQGQMHENSWSIEKEQWIDTWTNRRSDCDVYGFCGPFGICNSEGSPICSCLEGFEQRNQQEWNQKNWTNGCVRKELLQCENAKNQSKSSQRNEADSFLKLSNVKVPDFAELSSNEQDECKNQCLMNCSCTAYSYATDIGCMSWNGNLTDIQQFQTGGTDLYIRVPYVELDISDKGHKGTITIAVSFSIVSIGIIVIVIVAYFIWIKDSKSERKKKLHTIFRFHKIEKPEEHTSDNVNGELSQAKLQELLLFNFEKLATATNNFHSSNKLGQGGFGPVYKGILQDGKEIAVKRLSISSGQGLKEFMNEVVVISKLQHRNLVRLLGCCTERNEKMLMYEFMPNGSLDAYIFDSSRNKLLDWEKRFSIIEGIARGLVYLHRDSRLKIIHRDLKASNILLDEEMNPKISDFGMARIFGVSEDHANTQRIVGTYGYMAPEYAMQGVFSDKSDVFSFGVLLIEIVCGRRNSSFYEHENSLTLLGFAWTQWREGNIVCLIEPEIYDHNHHKEILRCIHIGLLCVQESAIDRPTMATVISMLNSEIMEIPPARQPAFLLMQNMMNTVCSEERNEVYSNNAVSITDLHGR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3369 836 SMART blect_4 32 151 IPR001480 -
Psa3g3369 836 Pfam D-mannose binding lectin 73 168 IPR001480 -
Psa3g3369 836 CDD B_lectin 36 151 IPR001480 -
Psa3g3369 836 Gene3D - 25 149 IPR036426 -
Psa3g3369 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Psa3g3369 836 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 834 - -
Psa3g3369 836 Pfam S-locus glycoprotein domain 203 312 IPR000858 GO:0048544
Psa3g3369 836 Gene3D Transferase(Phosphotransferase) domain 1 594 797 - -
Psa3g3369 836 SMART serkin_6 518 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3369 836 CDD STKc_IRAK 524 790 - -
Psa3g3369 836 PIRSF SRK 1 836 IPR024171 GO:0004674
Psa3g3369 836 Pfam PAN-like domain 347 405 IPR003609 -
Psa3g3369 836 ProSiteProfiles PAN/Apple domain profile. 334 420 IPR003609 -
Psa3g3369 836 SUPERFAMILY Protein kinase-like (PK-like) 496 789 IPR011009 -
Psa3g3369 836 ProSiteProfiles Protein kinase domain profile. 518 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3369 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 210 IPR036426 -
Psa3g3369 836 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Psa3g3369 836 Gene3D Phosphorylase Kinase; domain 1 479 593 - -
Psa3g3369 836 SMART ntp_6 347 419 IPR003609 -
Psa3g3369 836 Pfam Protein tyrosine and serine/threonine kinase 520 787 IPR001245 GO:0004672|GO:0006468
Psa3g3369 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 23 834 - -
Psa3g3369 836 CDD PAN_AP_plant 332 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3369 Psa-Chr3 284834800 284838556 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3369 426 832 Receptor kinase-like Gene Family AT3G45860 48.411 3.72e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa3g3369 PK_Tyr_Ser-Thr 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3369 - - mtr:MTR_7g056430 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3369 3 284834800 284838556 Psa3g3369 3 284834800 284838556 ECH