Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3367 ATGAACTTCATGTCTTTGCTACTCAAATATCAATTATTAACAATCATTTTCACTATCATAACCTTAACAAAAGTTACTTGCTTATATTTCAATTTCCCAACTTTCCAACCAAGTGATGAATCCAAATTGATACTAACCAAAAACTCAAAAATATATTTAGATGCCATTCAAATAACCCCAGATATCCGTGGTGAAATAAAGAATTATTCTGGACGTGCTTTTTACAATAAGCCATACACACTTTGGAACAAGAAAAACAACAAAATAGCTTCTTTCAACACCACTTTTGTTCTCAACATAAGTCCTCAAACATCCCCCGGTGGAGAAGGCATAGCCTTTATCTTAACAGCAGATACAGCTCTCCCTGAAAACAGTCAAGGAGAATGGTTTGGTATTGTAAATGCTTCTACAAATGGAACTTCTCGAGCTGGAATTCTCGCTGTAGAGTTCGATACACGACAAAGTTCAACACAAGACAGTCCTCACAACCATGTTGGAATCAACATAAATAGCATTTCATCGTTGAAAGAAGCATCGCTATCGAACACTAAGGTCAATCTTTCATCTGGTATAAATGTAACAATGAGAATTCAATATTCAAATGATATAATATCTGTTTTTGGTTCTATGAGTGAAAACTCATTAGATTCTATGGAGACACTTTTGGTTTCTCCGCCTCTTAATCTATCTTCCTATCTTAAACAAGAGGTTTACGTCGGTTTTTCTGCTTCAACGAGCAATTACACACAGCTAAATTGTGTGAAAGCGTGGGAATTCAATGGTTTAGATATTGGCAATAATAAAAAAATTCTCGTGTTGATTTGGATCATAGTTCCGGTTGTGATAATCATCGGCGGATTAGTTTTTTTCCTTGTTTATTTTCGAAGGAATAAAAACATGGAGATTTCAGAAGATACATATCCAAGGATAGAGGATCAAATTCAACGCTCATCTATGGCTCCAAAGAAATATGAATTAAAGGAACTAATAAAAGCAACAGCTGCATTCAGCCATCAGAACAAGCTTGGACAAGGTGGATTCGGAACTGTTTATAAGGGTATTCTTGGAAACAACAAAGAGATAGCTGTGAAGAGAGTCTCGAAGAATTCGCATCAAGGAAAGCAAGAACTTATAGCAGAAGTAACAACAATTGGAAGCCTTCACCACAAGAACTTAGTGAAACTCATTGGTTGGTGCTATGAGAAAAAAGAGCATCTTATTGTTTACGAGTTCATGCCAAATGGAAGCTTAGACAAATACCTATTCAACCAATCCAGCGATGAATTTGAATCGTGTTATTCAAAAGTACTAGATTGGAATACAAGAAATAGTGTGATCCGTGGCGTGGCGCAAGCATTGGATTATCTTCACAACAATTGTGAAAAAAGAGTACTTCATAGAGACATTAAAGCAAGCAACATTATGTTGGACTTAGATTATAATGCGAAATTGGGCGATTTTGGATTGGCGCGGACAATTCAAAAGAGAAATGAAACTCATCATTCAACAAAAGAAATTGCGGGAACCCCGGGTTATATGGCACCGGAGACTTTTCTAACGGGTAGAGCGACGGTGGAAACTGATGTGTATGCATTTGGTGTTCTTGTTTTGGAAGTTGTGTGTGGAAAAAGACCAGGAAATATGTATGCAGAAGATGATTATAAGAATAGTATTGTTTATTGGGTTTGGGAACATTATGGAAATGGGAGAATCATTAGAGTTGTTGATAAAAGGATAAGTGGTTGTGAAAAGGATGAGATTGAGAAGGTGAAATTGGAGGAAGAAGTTGAAATTGTGCTTATTCTTGGGTTGGCTTGTTGTCATCCAAACCCAAATGAAAGGCCATCAATACAAGCTGTTTTGATGGTTCTAAATGGAGAAGCTTCTCCTCCAACTGTTCCAATGGAAAGGCCTTCTTTTGTTTGGCCGGCGATGCCTTCGTCATTCAAAGAAGGTGAAGATAGTTCTCTTATCAATGGAACTCTCACTCCATTCACTCAACTAAGTGGCAGATAA 2016 0.37 MNFMSLLLKYQLLTIIFTIITLTKVTCLYFNFPTFQPSDESKLILTKNSKIYLDAIQITPDIRGEIKNYSGRAFYNKPYTLWNKKNNKIASFNTTFVLNISPQTSPGGEGIAFILTADTALPENSQGEWFGIVNASTNGTSRAGILAVEFDTRQSSTQDSPHNHVGININSISSLKEASLSNTKVNLSSGINVTMRIQYSNDIISVFGSMSENSLDSMETLLVSPPLNLSSYLKQEVYVGFSASTSNYTQLNCVKAWEFNGLDIGNNKKILVLIWIIVPVVIIIGGLVFFLVYFRRNKNMEISEDTYPRIEDQIQRSSMAPKKYELKELIKATAAFSHQNKLGQGGFGTVYKGILGNNKEIAVKRVSKNSHQGKQELIAEVTTIGSLHHKNLVKLIGWCYEKKEHLIVYEFMPNGSLDKYLFNQSSDEFESCYSKVLDWNTRNSVIRGVAQALDYLHNNCEKRVLHRDIKASNIMLDLDYNAKLGDFGLARTIQKRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGKRPGNMYAEDDYKNSIVYWVWEHYGNGRIIRVVDKRISGCEKDEIEKVKLEEEVEIVLILGLACCHPNPNERPSIQAVLMVLNGEASPPTVPMERPSFVWPAMPSSFKEGEDSSLINGTLTPFTQLSGR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3367 671 SUPERFAMILY Protein kinase-like (PK-like) 318 624 IPR011009 -
Psa3g3367 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Psa3g3367 671 CDD STKc_IRAK 342 626 - -
Psa3g3367 671 ProSiteProfiles Protein kinase domain profile. 336 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3367 671 Gene3D - 26 270 - -
Psa3g3367 671 Pfam Legume lectin domain 28 262 IPR001220 GO:0030246
Psa3g3367 671 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 12 659 - -
Psa3g3367 671 Pfam Protein kinase domain 337 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3367 671 CDD lectin_legume_LecRK_Arcelin_ConA 28 260 IPR001220 GO:0030246
Psa3g3367 671 Gene3D Transferase(Phosphotransferase) domain 1 412 630 - -
Psa3g3367 671 Gene3D Phosphorylase Kinase; domain 1 298 411 - -
Psa3g3367 671 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Psa3g3367 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 262 IPR013320 -
Psa3g3367 671 SMART serkin_6 336 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3367 671 PANTHER - 12 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3367 Psa-Chr3 284760531 284763022 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3367 8 640 Receptor kinase-like Gene Family AT5G55830 35.294 2.98e-122 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa3g3367 Pkinase 1.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3367 - - gmx:100785031 964.911