Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3339 ATGAAGGAAAGTGGAACAACAACAACAACAGGAGCACCTTCTTCTTCATCTTCTTCATGGAATAGGCTCCCTCCTATGCCTCCACAAAGATTTGAAGATAGCGATGAAGATCTATTCGAAGTTCCAGACGTAGAAGCTACACAATGTCAAAGTGTTCATTCTGAAGCCACAAATCAAAACAGTAACCATAATCAAAGCAATGTAACAGATCCTCAACTTCAAACCGGAAAGCGTCGTCGAGGAAGAAACCCGGTCGATAAAGAGTATAGACGACTCAAAAGGTTGCTAAGGAACAGGGTCTCTGCCCAACAAGCTAGAGAAAGAAAGAAGGTTTATGTGAATGAGTTAGAATCAAGAGCTAAAGAGATGGAAGATAAGAACTCGAATTTAGAAGAACGTATTTCAACTTTGATGAATGAGAACACCATGCTCAGAAAGGTTCTTATGAACACTAGACCCAAAGTTGATGAGAGTAACGAAGGATAA 486 0.4012 MKESGTTTTTGAPSSSSSSWNRLPPMPPQRFEDSDEDLFEVPDVEATQCQSVHSEATNQNSNHNQSNVTDPQLQTGKRRRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNELESRAKEMEDKNSNLEERISTLMNENTMLRKVLMNTRPKVDESNEG* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3339 161 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 9 160 IPR044280 GO:0000981|GO:0045944
Psa3g3339 161 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 9 160 - -
Psa3g3339 161 SMART brlzneu 86 150 IPR004827 GO:0003700|GO:0006355
Psa3g3339 161 Gene3D Single helix bin 109 150 - -
Psa3g3339 161 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 93 108 IPR004827 GO:0003700|GO:0006355
Psa3g3339 161 MobiDBLite consensus disorder prediction 1 24 - -
Psa3g3339 161 MobiDBLite consensus disorder prediction 1 88 - -
Psa3g3339 161 CDD bZIP_HY5-like 100 141 - -
Psa3g3339 161 Coils Coil 106 147 - -
Psa3g3339 161 Pfam bZIP transcription factor 87 146 IPR004827 GO:0003700|GO:0006355
Psa3g3339 161 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 151 IPR004827 GO:0003700|GO:0006355
Psa3g3339 161 MobiDBLite consensus disorder prediction 47 74 - -
Psa3g3339 161 SUPERFAMILY Leucine zipper domain 89 149 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3339 Psa-Chr3 283080315 283087740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3339 52 157 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 66.038 4.54e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa3g3339 bZIP_1 8.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3339 K16241 - gmx:778143 208.379