Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3338 ATGGATTTAAGAGATTCATGGACTGTCTTCTTTCTGTTTTGTAGCTTTTTGGTTGTTGCATTCTGTGGACAAAATGGCTTCTTGAGTCTATCATGTGGTGGAACAACAAGCTTCAGTGATTCATCAAACATTTCATGGTTCTCGGACACTCCTTACATAACCAATGGAAAGACAGTCACCATCAATTACCGCGATGGTTCCTTGTCATCAAACGTCTCGGCTCGGTTCTTCCCTCATTCAAGAGGCCGCGCATGTTATCGAATACCAGTGAACAATGCGACTAGTTTGATTCTTGTTAGAGCTAAATTTGTATACAAAAACTATGATAGACTTGAAAAACCACCTATTTTCTATGTTTCTCTTGGGACAGCTATTGCTGCTAAGATAAATTTGGCCAAAAATGATCCATGGATAGAAGAGTTTCTCTGGGAAGTCAATAAGGATACATTGGCATTCTGTTTGAATCCAACTCCAAGTGGCAGTTCTCCGGTAATTTCTTTACTTGAAACTAGGCCACTTCCTAAAGGGTCTTACACAAAGGGCAAAGAAGATTTCACAAATAAATTACTTAGGATGAGTTATAGAATTGATTGTGGACACATCAATGAGTCTATAAGGTACCCTATGGATCCATATGACAGAATATGGAATGGTGATAGAAGTTTCGTACCTTTTCATGCTACAAAAGGGTTTAAGATTCATAACAGCTTCAATCAATCCAATATTGTGGAGAAACCGCCGTCTGCTGTTCTTCAAACGGGAAGAGTCTTGGCACGACAAAATACGATGGCGTATAACCTCCCTCTTGAGGGATTAGGGGACTACTACATCATCCTTTATTTTGCTTCAATTCTTCCTGTGTTTTCCTCATTTGATGTGTTCATAAATGGAGATAATGTAAAAACAAACTATACAATAAAAAGATCAGAAATCAGCGCTTTATATATTACAAGAAAGAGGATCAACAACTTGAATATAACACTAAGAAGTGTCAACTTCTACCCTCAGATCAATGCGTTTGAGGTATATAATATGGTCGATATTCCGCCTGAAGCCTCCTCGACCACAGTTTCAGCAATGCAGGTTATTCAGCAGTCGACTGGCTTGGATCTAGGATGGCAAGATGATCCATGCTCGCCTTTTCCATGGGATCACATAGATTGTGAAGGAAACTTAGTTACATCATTGGCTCTCTCAGACATAAATTTGAGATCAATTAGTCCTACATTTGGTGACTTGTTGGACCTTAAAACATTGGATTTGCACAACACATCGCTTGCTGGCGAAATCCAGAATTTGGGTAGCTTGCAAAGTCTTGCAAAACTGAACCTTAGTTTCAATCAACTGACATCCTTTGGTGTAGAGCTCGAAAACTTGATAAGACTTCAAATTCTAGACTTGCAAAGCAATAGTCTCCAAGGATTAGTGCCTAATAGCTTGGGAGAGATAGAAAACCTTCACTTACTAAATCTAGAAAACAACAAACTACAAGGTCCACTTCCACAGTCTTTGAACAAAGACACCATAGAGATCAGAACATCTGGGAATTTGTGCCTTACTTTTTCCACAACCGTGTGCGATGATGCATCATCCGATACTCCTTCAATTGAGGCACCACAACTGATTACAGTTCCCGGAAGGAAGAACCACGGACAAAACCATCTAGCAATAATACTTAGCACAATTGGAGGAGCTGCACTTACCATTTTCCTGATATGTCTTTCGGTATTTATATACAAAGCTAAACGAAGATATGAAGCCTTACACAAAACTAGGGAAGAAACTGATGCGAGGAACTGGGGTGCAGAAAAAGTTTTTACCTACAAAGAAATCAAAGTAGCTACTAGCAGTTTTAAGGAAATCATAGGAAGAGGAAGTTTTGGATCTGTTTACCTTGGAAGGCTTCCCAACGGAAAATCAGTTGCTGTCAAAGTTCGGTTCGATAAATCCCAACTTGGGGTTGATTCTTTTATCAATGAGATTCATCTCCTGTCAAAAATACGCCATCAAAATCTCGTGTCTTTAGAAGGATTCTGTCATGAATCGAAGCATCAGATATTGGTTTATGAATACTTGCCCGGTGGATCCCTGGCTGATCACCTCTACGGTGCAAACAGCTATAAAACTCCCTTAAGCTGGATGCGAAGGTTGAAAATTGCTGTCGATGCAGCAAAAGGATTGGACTATTTGCATAACGGAATTGTTCTATTGGAACTCATTTGTGGAAGAGAACCATTGATCCACTCGGGGACTCCTGATTCATTCAATTTGGTTTTATGGGCAAAACCATATTTACAGGCGGGCGCATTCGAAATTGTGGATGAAAGAATACAAGGAACTTTTGATCTAGAGAGCATGAAGAAGGCAGCCTCCATAGCTGTGAATTCGGTGGAAAGAGATGCATCACAGAGACCACCTATTGCTGAAGTATTAGCCGAGCTAAAGGAAGCTTATGGCATCCAGCTCAGATTTTCGGAGTCTTGTGAAAATGAGAATTGA 2499 0.3998 MDLRDSWTVFFLFCSFLVVAFCGQNGFLSLSCGGTTSFSDSSNISWFSDTPYITNGKTVTINYRDGSLSSNVSARFFPHSRGRACYRIPVNNATSLILVRAKFVYKNYDRLEKPPIFYVSLGTAIAAKINLAKNDPWIEEFLWEVNKDTLAFCLNPTPSGSSPVISLLETRPLPKGSYTKGKEDFTNKLLRMSYRIDCGHINESIRYPMDPYDRIWNGDRSFVPFHATKGFKIHNSFNQSNIVEKPPSAVLQTGRVLARQNTMAYNLPLEGLGDYYIILYFASILPVFSSFDVFINGDNVKTNYTIKRSEISALYITRKRINNLNITLRSVNFYPQINAFEVYNMVDIPPEASSTTVSAMQVIQQSTGLDLGWQDDPCSPFPWDHIDCEGNLVTSLALSDINLRSISPTFGDLLDLKTLDLHNTSLAGEIQNLGSLQSLAKLNLSFNQLTSFGVELENLIRLQILDLQSNSLQGLVPNSLGEIENLHLLNLENNKLQGPLPQSLNKDTIEIRTSGNLCLTFSTTVCDDASSDTPSIEAPQLITVPGRKNHGQNHLAIILSTIGGAALTIFLICLSVFIYKAKRRYEALHKTREETDARNWGAEKVFTYKEIKVATSSFKEIIGRGSFGSVYLGRLPNGKSVAVKVRFDKSQLGVDSFINEIHLLSKIRHQNLVSLEGFCHESKHQILVYEYLPGGSLADHLYGANSYKTPLSWMRRLKIAVDAAKGLDYLHNGIVLLELICGREPLIHSGTPDSFNLVLWAKPYLQAGAFEIVDERIQGTFDLESMKKAASIAVNSVERDASQRPPIAEVLAELKEAYGIQLRFSESCENEN* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3338 832 Gene3D Ribonuclease Inhibitor 356 528 IPR032675 -
Psa3g3338 832 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Psa3g3338 832 Pfam Malectin-like domain 30 344 IPR024788 -
Psa3g3338 832 Coils Coil 830 832 - -
Psa3g3338 832 Gene3D Transferase(Phosphotransferase) domain 1 692 733 - -
Psa3g3338 832 Pfam Protein tyrosine and serine/threonine kinase 618 736 IPR001245 GO:0004672|GO:0006468
Psa3g3338 832 PANTHER OS07G0107800 PROTEIN-RELATED 733 824 - -
Psa3g3338 832 PANTHER OS07G0107800 PROTEIN-RELATED 10 733 - -
Psa3g3338 832 Pfam Leucine rich repeat 438 496 IPR001611 GO:0005515
Psa3g3338 832 Gene3D Transferase(Phosphotransferase) domain 1 734 823 - -
Psa3g3338 832 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 733 - -
Psa3g3338 832 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 733 824 - -
Psa3g3338 832 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Psa3g3338 832 SUPERFAMILY L domain-like 358 506 - -
Psa3g3338 832 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Psa3g3338 832 Gene3D Phosphorylase Kinase; domain 1 588 691 - -
Psa3g3338 832 Gene3D - 190 346 - -
Psa3g3338 832 ProSiteProfiles Protein kinase domain profile. 616 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3338 832 SUPERFAMILY Protein kinase-like (PK-like) 599 812 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3338 Psa-Chr3 283051620 283056086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3338 733 824 Receptor kinase-like Gene Family AT5G48740 73.913 3.27e-35 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Psa3g3338 Malectin_like 2.2e-52 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3338 - - aprc:113850446 1119.38