Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3334 ATGGTTTGCAGCATTCACATTTTAGTTTTGGTAATAAATCGATCCTATTTTTTGTGTTTTGATTCATGGCCTTTGATATCTAATTGTAAGGAACGTAGAACTGAGATTGATCAACGTTATTTGGTCATTATTTATCATCAAATTTGCAGTTTAAGTGTTGGTACAGACACCATCACATCATCTCAATATATCAAGATCAAGGGCCCTGAAACTCTAATCTCCAAAGATGGTAACTTCACCTTGGGAGTTTTTAGCCCTAAAAACTCTACAAAACGATACGTTGGAATTTGGTGGAAGCTTCAATCTACAGTCATATGGGTGGCAAACAGAAACCAACCACTAAATGATTCTAATGGGATTATCACAATATCTGAAGATGGCAATCTTGTGATATTAAATGGACAAGAACAAGTCGTATGGTCATCAAATGTTTCCAACATTGGATCAAATACAAGATCTGAATTTTCAGAATTTGGTAACCTCGTTCTTTCGGAGAGCACAACGGGGAAAATCTTATGGCAGAGTATTCAGCATCCTTCAGATACATTACTGCCGAGCATGAAACTTTCAACCAACAAAAGAACAGGTACGAGTATAAAAATCAAATCATGGAAAAGTCCTACTGACCCATCCATTGGAAACTTTTTTTGTAGTACTGTTGAACGCCTACACATAATTGAAGTGTTCATTTGGAATGGAACTCGGCCATATTGGCGCAGCGGTCCCTGGAATGGCAGGGTCTTCACTGGAATACAATCAATGACAGTTGGATATTTTTTTGGTTTTCAAGGAGGAGATGATGGTGAAGGGAATACTAACATATATTTTACAATACCAAATGATGAGAATTTTTTGATCTATCGCCTGAGCTCACAAGGAAAATTAGAAGAAATGTGGTGGGATGATGAAAGGAAAGAAATGCAAGTTACATGGACAAGCTGGGATTCCGAGTGTGATGTATACGGTATATGTGGGGCATTTGCAAGCTGTAATTCATTGAGTTCCCCAATATGTAGCTGTTTGAGAGGGTTTGAACCCAGAAACATACAAGAATGGAATAGACATGACTGGACTGGTGGGTGTGTTCGGAGGACACGTTTACAGTGTGAAAGGGTTGTCAATAAAACCACAAGTACAAAGGAGGACGTGTTTTTGAAATTGCAAAAGGTTAAAGTTCCAGATTTTGCAGAAGGCGTAGCTGTTACACCAGAAATGTGCATAAGCATATGCTTGAGTAATTGCTCTTGCACTGCGTACTCTTTTGCTGATGGGATTGGTTGTATGTCTTGGACCGGCAATCTACATGACATACAGCAACTCCAAGATGGAGGACTTGATCTATTTGTTCGTGCAGCCTATGTAGAACTTGATCAAGAGAGAAACATGACAATAATCATTATAACTACGGTGATAATTGGAACTTTCATAATTGTCATTTGTGCATATATCATGTGGAGAAGGACATCAAACCAACCAGCTAAACAGTGGCTCTTTACTAAATCAGCAAGGAAAAAGAACAACAAAGCTTTCCAACTATTTAATAAAGGTGGATCACCAGAAGGTTATGCTAGTGACAACGTAATTGGAGAAATGTCCCATGTTAAACTTCAAGAGCTATTAATGTTTGATTTTGAAAAGCTTGCATCTGCCACAGACAACTTCCACTTGTCCAACAAGCTTGGACAAGGTGGTTTTGGTCCAGTATACAAGGGGAAACTGCAAGATGGTCGAGAAATAGCCGTTAAAAGACTTTCTAGAGCATCTGGACAAGGGCTGGAGGAATTCATGAATGAAGTAGTGGTGATTTGTAAGCTTCAACACCGCAATCTTGTAAGACTCATTGGTTGCTGTATCGAAGGTGATGAAAAGATGTTGATGTATGAGTACATGCCAAACAAAAGTTTGGATGCATTCATCTTTGATCCATCAAAAAATAATCTCCTAAATTGGAGTACACGGTATAACATAATAGAAGGAATAGCTCGTGGATTGCTATATCTTCACAGAGATTCTAGACTAAGAATTATTCATAGAGATTTGAAGGCAAGTAATGTCTTGTTAGACGAGGAGCTAAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGGGGAGTAGATCAAGCCAATACTAGCAGGATTGTTGGAACCTATGGCTATATGTCTCCTGAATATGCAATGCAAGGATTATTTTCAGAGAAATCAGATGTTTTTAGCTTTGGTGTTTTGTTACTAGAGATTCTTACGGGGAGAAGGAACTCAAGTTTTTGTGACAATGAGCATTCACTGAGCCTTTTGGGTTTTGTAAGCCTCAACAAGCTATTTTTTACTCGACTAATAGACTTTTTATTTTGTTGA 2364 0.382 MVCSIHILVLVINRSYFLCFDSWPLISNCKERRTEIDQRYLVIIYHQICSLSVGTDTITSSQYIKIKGPETLISKDGNFTLGVFSPKNSTKRYVGIWWKLQSTVIWVANRNQPLNDSNGIITISEDGNLVILNGQEQVVWSSNVSNIGSNTRSEFSEFGNLVLSESTTGKILWQSIQHPSDTLLPSMKLSTNKRTGTSIKIKSWKSPTDPSIGNFFCSTVERLHIIEVFIWNGTRPYWRSGPWNGRVFTGIQSMTVGYFFGFQGGDDGEGNTNIYFTIPNDENFLIYRLSSQGKLEEMWWDDERKEMQVTWTSWDSECDVYGICGAFASCNSLSSPICSCLRGFEPRNIQEWNRHDWTGGCVRRTRLQCERVVNKTTSTKEDVFLKLQKVKVPDFAEGVAVTPEMCISICLSNCSCTAYSFADGIGCMSWTGNLHDIQQLQDGGLDLFVRAAYVELDQERNMTIIIITTVIIGTFIIVICAYIMWRRTSNQPAKQWLFTKSARKKNNKAFQLFNKGGSPEGYASDNVIGEMSHVKLQELLMFDFEKLASATDNFHLSNKLGQGGFGPVYKGKLQDGREIAVKRLSRASGQGLEEFMNEVVVICKLQHRNLVRLIGCCIEGDEKMLMYEYMPNKSLDAFIFDPSKNNLLNWSTRYNIIEGIARGLLYLHRDSRLRIIHRDLKASNVLLDEELNPKISDFGMARIFGGGVDQANTSRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEILTGRRNSSFCDNEHSLSLLGFVSLNKLFFTRLIDFLFC* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3334 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 210 IPR036426 -
Psa3g3334 787 SMART ntp_6 379 451 IPR003609 -
Psa3g3334 787 SMART blect_4 63 179 IPR001480 -
Psa3g3334 787 Pfam PAN-like domain 379 437 IPR003609 -
Psa3g3334 787 SUPERFAMILY Protein kinase-like (PK-like) 537 764 IPR011009 -
Psa3g3334 787 Pfam S-locus glycoprotein domain 238 347 IPR000858 GO:0048544
Psa3g3334 787 Pfam D-mannose binding lectin 103 205 IPR001480 -
Psa3g3334 787 ProSiteProfiles Bulb-type lectin domain profile. 57 176 IPR001480 -
Psa3g3334 787 ProSiteProfiles Protein kinase domain profile. 554 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3334 787 Pfam Protein tyrosine and serine/threonine kinase 555 761 IPR001245 GO:0004672|GO:0006468
Psa3g3334 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Psa3g3334 787 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 41 767 - -
Psa3g3334 787 Gene3D Transferase(Phosphotransferase) domain 1 630 779 - -
Psa3g3334 787 SMART serkin_6 554 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3334 787 Gene3D - 51 177 IPR036426 -
Psa3g3334 787 PIRSF SRK 37 783 IPR024171 GO:0004674
Psa3g3334 787 CDD B_lectin 66 179 IPR001480 -
Psa3g3334 787 Gene3D Phosphorylase Kinase; domain 1 527 629 - -
Psa3g3334 787 PANTHER - 41 767 - -
Psa3g3334 787 CDD PAN_AP_plant 365 450 - -
Psa3g3334 787 ProSiteProfiles PAN/Apple domain profile. 369 452 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3334 Psa-Chr3 282827458 282835007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3334 540 768 Receptor kinase-like Gene Family AT4G11530 66.376 1.53e-100 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Psa3g3334 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3334 - - mtr:MTR_7g056623 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3334 3 282827458 282835007 Psa3g3334 3 282827458 282835007 ECH