Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3309 ATGTTGGCTTTAACAGTTTCACATATTTTCCTACTCTTTTTGCTATATCCCTTCCAATGTTCATGCTCTTTATCATCATTGAACAAGGGCTCTTTTCTCTCGGTAGAGAAACATGGAGAAGATGTAATCGTTTCTTCAAATGGTACATTCTCTGCTGGATTCTATCAAGTTGGAGAAAACGCATTCTCCTTTGCCATATGGTTCACAGAGCTGCACAATCACAACCCTGACAATATTGTATGGATGGCAAATCGTGAACAACCTGTCAATGGTAAGCACTCAAAGCTTTTCCTCTTAAACACAGGTAACATTCTCTTGCTTGATGCGGGTCAACTCAACACTTGGTCTTCAAACACAGCTTCAAATGCTCCATTAGAGTTGTATCTCAAAGAAGATGGTAATCTTGTGTTACGTGAGCTTCAAGGAACTAACATCTTATGGCAAAGCTATGATTTCCCAACAAATACTCTCCTTCCAAATCAACCTCTCACTAGATACACTAAACTTGTTTCTTCAAGAAGCTATAGTAATCACTCTTCTGGCTTCTATAAGTTATTCTTTGACGATAACAATGTTATTCGTCTCAATTATGACGGTCCTGATGTTTCAAGCACATACTGGCCACCAGCTTGGATGTCAAGTTGGGATGCTGGAAGGTCCAATTACAATAGTAGTAGAATTGCTTTGTTGGATTCTCTTGGAAAATTCATTTCATCAGATAATTACTTTTTCTCCACATATGATTATGGTATGGTTATGCAAAGGAGATTAACCATGGATTCTGATGGTAATATTCGAGTTTACAGTCGGAAAAACTTGTCAGAAAACTGGTACATTTCATGGCAAGTAATATTGAATACTTGCATCATTCATGGATATTGTGGTGCAAATAGCACTTGTAGCTATGATCCTAAAAAGGGTAAGAAATGCTCTTGTTTGCCAGGGTTTAAAGTGAAGAACCATAATGATTGGTCCATTGGTTGTGAACCTTTGTTTGATTTTACATGCAACAGAAGTGAGTCTACCTTTTTAAAACTACAAGGCTTTGAGCTCTATGGCTATGATGGTAATTTTGTTAAGAATATTACCTACAAAAACTGTGAGAGTTTGTGTTTACAACAATGTAACTGTACAGGATTCCAATACACATATGACGAGGACAGTAACATCTTCAAATGCTTTACAAAGTTACAATTGCTGAATGGGAGGCATTCACCAAGTTTTGCAGGAACTACTTACTTGAGACTTCCAAAAGGTAAGAAATTCTCAAAACAAGAGTTTGTGAGTGTAAAAGATCATGTTTGTTTGGTGCAGCTTTCTAAAGACTATGTCAGAAAACCAACAAACAATTTGGTGAGGTTTTTTCTGTGGATTTCAGTTGCGGTAGGTGGTTTAGAATTTGTTTTCTTTGTTGTGGTTTGTGGTTTTTTAATTAAAACCAAGAAAAAGTCTAGTGCGAATCAACATAGCCATGATCATCATGCATTATTGGGATTCAGAAGATATAGTTACTCCGAGTTGAAGGTAGCTACAAAGAATTTCAGTAATGAGATCGGAAGAGGTGGAGGAGGGGTTGTCTATAGAGGTACATTGCCAGATCAAAGAGATGTTGCAATAAAGAGATTGAATGAAGCTAAACAAGGAGAAGGAGAGTTTCAAGCTGAGGTAAGCATCATTGGAAGGCTTAACCACATGAACCTGATCGAAATGTGGGGATATTGTGTTGAAGGTATGCATAGACTTTTGGTATATGAGAACATGGAAAATGGTTCTTTGGCTGAAAATCTTTCATCCAAAACCAACATACTTGATTGGAGTAAAAGATATGATATCGCTTTAGGAATAGCTAGAGTTCTAGCATATCTACATGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCACAGAATATACTTCTTGACTCTAACTTTCAGCCCAAGTTAGCGGATTTCGGATTGTCTAAGCTAAAAACTAGAAACAAAGTCGATGATAATTCAACAATCTCAATGGTTAGAGGAACGAGAGGATACATGGCTCCGGAATGGATTTTCAATTTACCAATAACATCTAAAGTAGATATTTATAGTTATGGGATTGTTGTGTTGGAGATGATAACCGGAAAGAATCCAACAATGATGAATATAGAAGGAGATGATGGAGAAGTGGCATATAATGGAAGCTTGATAACTTGGGTAAGAGAGAAAAAGAGGAGTAGTACATGTTGGTTGGAAGAAATTTTGGATCCTGCAATAAGGACTAGTTGTGATTTAAGTAAGATGGAAGTTTTGGCTAGAGTTGCTTTGGACTGTGTAGAGCAAGATATGGATATTAGGCCTAATATGAGCCAGGTGGTTGAGATGCTTCAGAATAATGAAAGACTTGTTGAGTGA 2397 0.37 MLALTVSHIFLLFLLYPFQCSCSLSSLNKGSFLSVEKHGEDVIVSSNGTFSAGFYQVGENAFSFAIWFTELHNHNPDNIVWMANREQPVNGKHSKLFLLNTGNILLLDAGQLNTWSSNTASNAPLELYLKEDGNLVLRELQGTNILWQSYDFPTNTLLPNQPLTRYTKLVSSRSYSNHSSGFYKLFFDDNNVIRLNYDGPDVSSTYWPPAWMSSWDAGRSNYNSSRIALLDSLGKFISSDNYFFSTYDYGMVMQRRLTMDSDGNIRVYSRKNLSENWYISWQVILNTCIIHGYCGANSTCSYDPKKGKKCSCLPGFKVKNHNDWSIGCEPLFDFTCNRSESTFLKLQGFELYGYDGNFVKNITYKNCESLCLQQCNCTGFQYTYDEDSNIFKCFTKLQLLNGRHSPSFAGTTYLRLPKGKKFSKQEFVSVKDHVCLVQLSKDYVRKPTNNLVRFFLWISVAVGGLEFVFFVVVCGFLIKTKKKSSANQHSHDHHALLGFRRYSYSELKVATKNFSNEIGRGGGGVVYRGTLPDQRDVAIKRLNEAKQGEGEFQAEVSIIGRLNHMNLIEMWGYCVEGMHRLLVYENMENGSLAENLSSKTNILDWSKRYDIALGIARVLAYLHEECLEWILHCDIKPQNILLDSNFQPKLADFGLSKLKTRNKVDDNSTISMVRGTRGYMAPEWIFNLPITSKVDIYSYGIVVLEMITGKNPTMMNIEGDDGEVAYNGSLITWVREKKRSSTCWLEEILDPAIRTSCDLSKMEVLARVALDCVEQDMDIRPNMSQVVEMLQNNERLVE* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3309 798 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Psa3g3309 798 Pfam PAN-like domain 336 397 IPR003609 -
Psa3g3309 798 ProSiteProfiles Bulb-type lectin domain profile. 18 150 IPR001480 -
Psa3g3309 798 ProSiteProfiles EGF-like domain profile. 284 322 IPR000742 -
Psa3g3309 798 CDD B_lectin 43 153 IPR001480 -
Psa3g3309 798 SUPERFAMILY Protein kinase-like (PK-like) 490 790 IPR011009 -
Psa3g3309 798 CDD STKc_IRAK 530 792 - -
Psa3g3309 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 171 IPR036426 -
Psa3g3309 798 SMART serkin_6 512 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3309 798 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Psa3g3309 798 Pfam S-locus glycoprotein domain 246 319 IPR000858 GO:0048544
Psa3g3309 798 ProSiteProfiles Protein kinase domain profile. 512 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3309 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Psa3g3309 798 Gene3D - 25 151 IPR036426 -
Psa3g3309 798 CDD PAN_AP_plant 337 417 - -
Psa3g3309 798 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 795 - -
Psa3g3309 798 Pfam D-mannose binding lectin 79 166 IPR001480 -
Psa3g3309 798 Pfam Protein kinase domain 515 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3309 798 Gene3D Phosphorylase Kinase; domain 1 474 585 - -
Psa3g3309 798 SMART blect_4 34 153 IPR001480 -
Psa3g3309 798 Gene3D Transferase(Phosphotransferase) domain 1 587 797 - -
Psa3g3309 798 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 5 795 - -
Psa3g3309 798 PIRSF SRK 1 798 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3309 Psa-Chr3 281237803 281245023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3309 445 796 Receptor kinase-like Gene Family AT1G56120 39.178 1.63e-61 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Psa3g3309 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3309 - - gmx:100784287 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3309 3 281237803 281245023 Psa3g3309 3 281237803 281245023 ECH