Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3273 ATGGCATTTCTAAAAAACCTTTCCTCTCTCTACATTCCCTTCCTTTTCATCTTCTGTTTCCTCAACCAAGCCTCAGCAAAATCTCCAACCACTTCCTCTGATGTTCAACTCATCTTATTCAAAATCAAACCTTCACTCCAAGGCACCACAGAAAACCTTGTCCTATCCTCATGGAACACTTCAAATCCTCTCTGTCAATGGAGAGGACTCAAATGGGTCTTCACAAACGGTTCATCTCTTTCATGTACTGACTTATCTTCACCACAATGGAACAATCTTTCGTTTTCAAAAGACCCTTTTTTGCACTTGTTGTCTCTTCAACTCCCTTCAGCAAATCTCTCTGGTTCTCTCCCTAGAGAGCTTGGTCAGTTTCCTATGCTGCAAAGTCTTTACCTTAACATCAATTCATTGAGTGGAACCATTCCTCTTGAGCTTGGTTATGGCTCTTCACTTGATGATATTGATTTGAGTGATAATCTTTTGGTGGGTTCTCTTCCACCTTCTATATGGAATTTGTGTGATAAACTTGTTTCTCTTAAAGTTCATGGAAATTCATTATCTGGGTCTGTTTCAGAACCTGCATTACCTGATTCATCTTGTAAGGTTTTGCAGTTTCTTGATTTGGGTGGTAATAAATTTTCTGGTAATTTTCCTGATTTTGTTACTAAATTTGGTGCCTTAAAACAGCTTGATTTAGGGAGTAATATGTTTAGTGGTGCAATTTCTAATGGTTTAGTTGGACTTAGGTTAGAAAAATTGAATCTTTCTCATAACAATTTTAGTGGGGTTGTTCCGTTTTTCGGCGAATCGAATTTCGGTGTGGATTGTTTTGAAGGGAATAGTCCTGATTTGTGTGGTCCACCTTTGCAAAGCTGTGGTAAGAATTCTTCATTGAGTTCTGGTGCTGTTGCTGGTATTGTTATTAGTCTTATGACAGGTGCTGTTGTTTTGGCTTCTTTGTTGATTGGTTATATGCAAAACAAGAAGAAAAAGGGGAGCGGTGAGAGTGAAGATGAGTTGAATGATGATGAAGAGGACGGGGAGAACGGTGGTGGTGGTTCGGTTGGTGGAAATGGTGGTGAAGGAAAGCTTATGTTGTTTCCGGGTGGTGAGAATTTGACACTTGATGATGTGTTGAATGCGACCGGGCAAGTTATGGAGAAGACGTGTTATGGAACTGCTTATAAGGCTAAGCTTGCTGATGGTGGGACGATCGCGTTGAGGTTGTTGAGGGAAGGTACTTGCAAGGATAGGAGTTCGTGTTTGGCCGTTATTAAACAGTTGGGGAAAATTCGACACGAGAATTTGATTCCTTTGAGAGCTTTCTATCAAGGGAAGAGAGGGGAGAAGCTGCTTATTTATGACTATTTGCCTCTCAGAACACTTCATGAACTTTTGCATGAAATTAAAGCAGGAAAACCAGTGTTAAACTGGGCAAGGAGACACAAGATTGCATTAGGTATAGCAAGAGGACTAGCATATCTTCATACAGGACTCGACGTTCCTATAACTCACGCAAACGTAAGATCCAAGAACGTGCTCGTAGACGACTTCTTCGTTGCCAGGATCACCGACTTCGCCCTCGATAAGCTAATGATCCCTTCCATAGCAGATGAAATGGTGGCACTCGCCAAGACAGACGGCTACAAAGCACCAGAGCTTCAAAGAATGAAGAAATGCAACTCAAGGACCGACGTCTACGCCTTCGGTATACTACTTCTCGAAATCTTAATCGGCAGGAAGCCTGGTAAGAACGGAAGAAGCGGCGAGTACATAGATTTACCTTCGATGGTGAAAGTAGCGGTCTTGGAGGAAACTACAATGGAGGTTTTCGACGTGGAACTGTTGAAAGGGATAAGAAGTCCAATGGAAGACGGGCTGGTTCAGGCGTTGAAGCTGGCGATGGGATGTTGTGCACCGGTGGCGTCGGTTAGACCGAGCATGGAGGAAGTTGTGAGGCAGTTGGAGGAGAATAGGCCAAGAAACAGGTCTGCTTTATACAGTCCAACTGAGACAAGAAGTGGAAGTATTACACCATTTTGA 2043 0.4263 MAFLKNLSSLYIPFLFIFCFLNQASAKSPTTSSDVQLILFKIKPSLQGTTENLVLSSWNTSNPLCQWRGLKWVFTNGSSLSCTDLSSPQWNNLSFSKDPFLHLLSLQLPSANLSGSLPRELGQFPMLQSLYLNINSLSGTIPLELGYGSSLDDIDLSDNLLVGSLPPSIWNLCDKLVSLKVHGNSLSGSVSEPALPDSSCKVLQFLDLGGNKFSGNFPDFVTKFGALKQLDLGSNMFSGAISNGLVGLRLEKLNLSHNNFSGVVPFFGESNFGVDCFEGNSPDLCGPPLQSCGKNSSLSSGAVAGIVISLMTGAVVLASLLIGYMQNKKKKGSGESEDELNDDEEDGENGGGGSVGGNGGEGKLMLFPGGENLTLDDVLNATGQVMEKTCYGTAYKAKLADGGTIALRLLREGTCKDRSSCLAVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHELLHEIKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHANVRSKNVLVDDFFVARITDFALDKLMIPSIADEMVALAKTDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGRKPGKNGRSGEYIDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSITPF* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3273 680 Gene3D Ribonuclease Inhibitor 199 296 IPR032675 -
Psa3g3273 680 MobiDBLite consensus disorder prediction 332 355 - -
Psa3g3273 680 MobiDBLite consensus disorder prediction 661 680 - -
Psa3g3273 680 Gene3D Transferase(Phosphotransferase) domain 1 459 672 - -
Psa3g3273 680 MobiDBLite consensus disorder prediction 655 680 - -
Psa3g3273 680 ProSiteProfiles Protein kinase domain profile. 380 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3273 680 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 5 680 - -
Psa3g3273 680 Pfam Protein tyrosine and serine/threonine kinase 384 655 IPR001245 GO:0004672|GO:0006468
Psa3g3273 680 Gene3D Phosphorylase Kinase; domain 1 369 456 - -
Psa3g3273 680 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 5 680 - -
Psa3g3273 680 Gene3D Ribonuclease Inhibitor 34 198 IPR032675 -
Psa3g3273 680 SUPERFAMILY L domain-like 68 267 - -
Psa3g3273 680 SUPERFAMILY Protein kinase-like (PK-like) 389 656 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3273 Psa-Chr3 277068130 277070939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3273 4 680 Receptor kinase-like Gene Family AT3G24660 71.829 0.0 916
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa3g3273 PK_Tyr_Ser-Thr 9.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3273 - - gmx:100814814 1086.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3273 3 277068130 277070939 Psa3g3273 3 277068130 277070939 ECH