Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3231 ATGTCTCCTTGTTCCATAACCAACAACCTCCTCCTTCGCAATCTCTCAATATTCTTCAGAAAATGGACCACAAAAGTGTACACAATCGCCGCATTCGCCTTAATCCTCTTCCTCTCTTACGCTTTCCTCATCCGATCCAATCCCGACTCTACTCTCTCTCCCTCCACCTCCACCTCCCTCCTCATCCCCTTCACCCCTCTCACCAACTTCAAACAAATCGGCGCACTTTGTTTGGATGGGTCTGCTCCCGGTTACCATTTCCAAAAGGGATTTGGATCCGGTTCGCGTAATTGGTTGCTTCATCTCGAGGGAGGAGGGTGGTGCAGTTCGATAGCTTCCTGTTCTTATAGGAAAACAACTGCTTTGGGGTCATCTAATTATATGGATTCACCCGTTCTTTTTTCAGGGATGCTAAGCTCTGTTGCTTCTCAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTACTGTGATGGTGCATCCTTTGCTGGTCACCCAGAAAGTGAGAAAGGAAGTGGGTTGTTCTTCAGAGGACAGATCATATGGGAAACTATTATGAATGAAATCTTATCGATTGGCATGTCAAAAGCAAAGCAGGCTCTGTTGACAGGATGCTCTGCTGGAGGATTGGCAAGTCTTATACATTGTGATAATTTCAGACATTTACTTCCAAAAGGGGCTACTGTCAAATGTCTCGCGGATGCAGGCTTCTTCCTTGACGAGAAGGATATTCTTGGAAATAGCACAATGAAATCTTTCTATAAGGATGTTGTCCAGCTCCAGGGTGTTGCAAAAAGTTTGCACAAAAAGTGCCTTGCTAAAATGGAACCATCTAAGTGTCTATTTTCATCAGAAATTCTGAAAAACATAAAGACTCCTGTTTTTCTTGTTCACCCAGCTTATGATTTTTGGCAGATACACAATATTTTGGTACCTCAAGGATCAGATCCCCATCATCGCTGGAAAAGCTGTAGATTGAACATTCAAAGTTGTGATGCTAACTTGATGGATACACTTAACAGTTTTCGTAGTTCTTTGCTGAGGACTGTGAACGAGTTCCAGCAGCGAAAGGATATTGGAATGTTTATAGATTCCTGCTTTATCCATTGCCAGACTTTGATCGGGGAGACTTGGTATTCACCTAATTCTCCAAAAATAAACAATAAGACAATTGCTGAATCCGTTGCCGATTGGTTTTTTGACCGACAAGCGGTAAAGCTTATTGACTGCCCTTATCCATGTAATCCTACTTGCCATAATTTGGATTTCACCAGAGTATAA 1287 0.425 MSPCSITNNLLLRNLSIFFRKWTTKVYTIAAFALILFLSYAFLIRSNPDSTLSPSTSTSLLIPFTPLTNFKQIGALCLDGSAPGYHFQKGFGSGSRNWLLHLEGGGWCSSIASCSYRKTTALGSSNYMDSPVLFSGMLSSVASQNPDFFNWNKVKIRYCDGASFAGHPESEKGSGLFFRGQIIWETIMNEILSIGMSKAKQALLTGCSAGGLASLIHCDNFRHLLPKGATVKCLADAGFFLDEKDILGNSTMKSFYKDVVQLQGVAKSLHKKCLAKMEPSKCLFSSEILKNIKTPVFLVHPAYDFWQIHNILVPQGSDPHHRWKSCRLNIQSCDANLMDTLNSFRSSLLRTVNEFQQRKDIGMFIDSCFIHCQTLIGETWYSPNSPKINNKTIAESVADWFFDRQAVKLIDCPYPCNPTCHNLDFTRV* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3231 428 Pfam Pectinacetylesterase 58 406 IPR004963 GO:0016787
Psa3g3231 428 PANTHER NOTUM-RELATED 22 421 IPR004963 GO:0016787
Psa3g3231 428 PANTHER PECTIN ACETYLESTERASE 4 22 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3231 Psa-Chr3 273323284 273328688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3231 20 392 Carbohydrate Esterase AT3G09410 58.793 1.32e-165 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3231 K19882 - gmx:100792819 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3231 3 273323284 273328688 Psa3g3231 3 273323284 273328688 ECH