Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3229 ATGTCTCCACCTGGTTCATCAAGATGGAGCCCTACAACTGAACAGCTTATGATCTTGGAAGAACTGTATAGAAGTGGAATTAGAACTCCTAGTGCTTCTCAAATTCAGCAAATTACTACTCACCTTTCTTTCTATGGTAGGATAGAAGGAAAAAATGTTTTCTATTGGTTTCAGAATCATAAGGCTAGGGATAGACAGAAACTTAGAAGGAAACTCAACAAACAACTGCAGCTACAGCAACAACAGCAACAGCACCAGCAACATCAACAACTTCATCATTGTCAACTCAATCATGATAATATCATGATTAGTAACCATTTTGTTGGTGGTACTTTTGGTTACCCTTTTGGATCTTCTACTCAAGACTTTTCCTTTTTTAACTCACCTAGCTTGCTTTTTGAGGGATCATATGCTGCAAACACATCACAAGGGCCAACCAACAGCAAATGGAATGGCTATAACAACCAACAAAATTTGGTGGAGAAGAAAGAGATTGCATTCAACAACTATGGTTGGAATAGCCTTATGGATAATGTTAATCATGAACCACCTTCATGTTGCACCAAACCTCTCAAGACTCTTGATCTCTTTCCACTCACAACAACAAGAATCAAAGAAGATTAG 624 0.3814 MSPPGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQQQQHQQHQQLHHCQLNHDNIMISNHFVGGTFGYPFGSSTQDFSFFNSPSLLFEGSYAANTSQGPTNSKWNGYNNQQNLVEKKEIAFNNYGWNSLMDNVNHEPPSCCTKPLKTLDLFPLTTTRIKED* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3229 207 Coils Coil 69 89 - -
Psa3g3229 207 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 206 IPR044555 GO:0003700|GO:0099402
Psa3g3229 207 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 206 - -
Psa3g3229 207 Gene3D - 2 67 - -
Psa3g3229 207 CDD homeodomain 8 67 IPR001356 GO:0003677
Psa3g3229 207 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Psa3g3229 207 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Psa3g3229 207 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Psa3g3229 207 SMART HOX_1 4 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3229 Psa-Chr3 273289327 273290717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3229 1 74 Wox Gene Family AT2G28610 83.784 7.16e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Psa3g3229 Homeodomain 6.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3229 - - cam:101510991 275.018