Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3225 ATGGGTAACAGAATCGGTAATCTCTGCCTCTGTTCCTCCGACGCCGGTGATACCTCCGGCAGGTTGCAAAACACCTCTACCTTCTTGTCCAAGAAACCTGACAGAGCTTTCTGCAACTCCGTCTGCTATGTCAGACCGGACCCACCACCTCGAAACTCCAACGACGGAGACATATTCTCTGATGACTCCGTCGCTACAATGAGTTTCAGTTCTGTCTCCAGCGCTACCGTTAGTGCAAACCCATTGTCAACACCTTCCATTATCCTCGATGACTCTAACACTGTTTTGGATTCTTCTGCTTCGTTTGAAAGCTTTGGCTCTTTCGTTTCCACAACGGCTCCTTGGAGTCGTTATGATCGTGGGATGGATGGTGATTACGTTGAGAATGATTCAGAGCATGAGAAGATGAAGCAGGCTAGTAAGATCAGCTTGAAGAATGCTCTGAGTAGAGTTTTTTCCAATGCAGTATTTGGAAAAGGCTCAAATTTTAAGAAAAGTGATAGTGGTAACGGCAATGGTTATGGAAGACTGAGTTGTGGTACTAGTTTGAGTGGTGATGATGCTGATGGCGGCGGTGGTGGTGGTGGACGTGATGAGTCGTTAATGGTGTGTGAGAATTTGGATATGGCTCGAGGAAAATGTGGCGAGGATCGTGTTCATATTATGATATCTGAGGATCATGGATGGGTTTATGTAGGAATTTATGATGGATTTAATGGTCCTGATGCAACTGATTATCTTCTGAAGAACATGTTTTCTGCTGTACATGATGAGCTTAAAGGGTTTCTGTGTAACCGAAACGGTGATAATGGACAAAGTTTTAGTCATTCATATGTGTTGGAAGCACTTTCTGAGGTAATGAAGAAAACTGAGGACGCGTTTCTGAAGATAGTTGATGAGATGATTACTAGTAGTCCCGTGTTAGCTATGATGGGTTCTTGTGTTTTGGTTATGCTGATGAAAGGCGAACATGTTTACTTGATGAATGTTGGTGATAGTCGCGCTGTTTTAGGGACTCGGACCGGAAATCATTTTCAGCTCACAGTGGATCATAACGCTCAAGCAAGAGAGGAGATTCGGAGAATCAGGCAGGAGCATCCAGATGACTCTTATGTGGTAACTAATGGGCGAGTGAAAGGTTACTTAAATATCACAAGGGCTTTTGGAGCAGGGTTTCTTAAGCAGCCTAAACAAAATGATGCAATGTTAGAGAGTTTCAAAGTTGACTACATAGGGGAATCTCCATATATCACATGCTCCCCTTCACTATATCATCACAGGCTCTGCCCAAATGACAAATTTCTCATACTGTCTTCTGATGGACTTTACCAATACTTGACCAATGAAGAAGCAGTTACCAAAGTAGAGCTATTCACATCAACTTTTCCATATGAAAATCCTGCTCAACTTCTCATTGAAGAGGCACTTAGCCGAGCAGCCAAAAAATATTGTATGGAGTTCCATGAGTTGCTTGAGATATCACAAGGAGAACGAAGAAGGTATCATGATGACATTTCTGTTGTCATAATATCCTTGGAGGGAAAAATATGGCATTCATAG 1560 0.4276 MGNRIGNLCLCSSDAGDTSGRLQNTSTFLSKKPDRAFCNSVCYVRPDPPPRNSNDGDIFSDDSVATMSFSSVSSATVSANPLSTPSIILDDSNTVLDSSASFESFGSFVSTTAPWSRYDRGMDGDYVENDSEHEKMKQASKISLKNALSRVFSNAVFGKGSNFKKSDSGNGNGYGRLSCGTSLSGDDADGGGGGGGRDESLMVCENLDMARGKCGEDRVHIMISEDHGWVYVGIYDGFNGPDATDYLLKNMFSAVHDELKGFLCNRNGDNGQSFSHSYVLEALSEVMKKTEDAFLKIVDEMITSSPVLAMMGSCVLVMLMKGEHVYLMNVGDSRAVLGTRTGNHFQLTVDHNAQAREEIRRIRQEHPDDSYVVTNGRVKGYLNITRAFGAGFLKQPKQNDAMLESFKVDYIGESPYITCSPSLYHHRLCPNDKFLILSSDGLYQYLTNEEAVTKVELFTSTFPYENPAQLLIEEALSRAAKKYCMEFHELLEISQGERRRYHDDISVVIISLEGKIWHS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3225 519 PANTHER PROTEIN PHOSPHATASE 2C 268 519 IPR015655 GO:0004722|GO:0006470
Psa3g3225 519 PANTHER PROTEIN PHOSPHATASE 2C 15 262 IPR015655 GO:0004722|GO:0006470
Psa3g3225 519 Gene3D - 197 517 IPR036457 -
Psa3g3225 519 SMART PP2C_4 200 510 IPR001932 -
Psa3g3225 519 SUPERFAMILY PP2C-like 210 513 IPR036457 -
Psa3g3225 519 Pfam Protein phosphatase 2C 226 481 IPR001932 -
Psa3g3225 519 CDD PP2Cc 215 512 IPR001932 -
Psa3g3225 519 ProSiteProfiles PPM-type phosphatase domain profile. 200 512 IPR001932 -
Psa3g3225 519 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 15 262 - -
Psa3g3225 519 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 268 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3225 Psa-Chr3 273120583 273123937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3225 1 519 PP2C-type Phosphatase Gene Family AT1G07630 40.634 2.28e-147 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3225 - K01102 gmx:100804061 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3225 3 273120583 273123937 Psa3g3225 3 273120583 273123937 ECH