Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3202 ATGAGTATGATTGAGTCATCCATCTCAAAGACAATGATGATGGAAAAAGTTATGAGTTCTAGTTGGTCAGAACAAGGGTCAGAAGATGATGAGCTTTTAAGAGAGCTTTTAGATGATGAGACTCCTCTTTTTATGTTGCCACAAGAGAGAGTAAATGAAGTAAGCAACAATATGAGTCATGATTCTTCAAAAGACCAACCTTTTAATAGGTTCATTTCAAATATTTATTCAGGTCCTACTATTTCAGATATTGAAAATGCTTTGTTTGTTACTAACCAAAGAGAGACTTTTCCACAAATTTCATCAACAAGAGTTTCTATATTGGAAGGAAGTTTGAGTAAGATTGAGAATAAGTACACTTTGAAAATCAAATGCTTTGGAAATGGAATGGGTGATGATGGATATAGGTGGAGGAAATATGGTCAAAAATCCATTAAGAATAGCCCAAATCCTAGAAGTTACTATAGGTGCACCAACCCAAGATGTAGTGCTAAGAAGCAAGTTGAAAGATCCAATGAAGATCATGACACTCTTATAATCACTTATGAAGGGCTTCACTTGCACTTTACTTATCCTTATTTCCTAGTGGGCCAATCACATCAATCTAGTTCTCATCCACCAATCAAGAGGCCCAAGCCCACATCTTCAAAAGGCCCAACACAAGCCCATCAAGGAAATGATGTTCATGAAGGCCAGAATATGAATATACAAGAAGCCCATGAAGCCCAAGCTAGTGCTTCTTTGGAACTCATATCACCACCCACCTTATTGGACTCTACACAAGATTTGGCCCAAGAAAATTTGGGCTCACAAGGGTTGCTTGAAGATATGGTGCCATTCATGGTTAGGAACCCTACAAACAATGTTGATAGTGATGATTACTCAGAATTTTCTTTTTCCTCACAACATTCTCCTCCAATGTTATGGACTTCTGGTTGTTCCACTTCCACCTCTTGTTATGCCGTTGGTTTAAATTCTAGTGTTTAG 987 0.3769 MSMIESSISKTMMMEKVMSSSWSEQGSEDDELLRELLDDETPLFMLPQERVNEVSNNMSHDSSKDQPFNRFISNIYSGPTISDIENALFVTNQRETFPQISSTRVSILEGSLSKIENKYTLKIKCFGNGMGDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDHDTLIITYEGLHLHFTYPYFLVGQSHQSSSHPPIKRPKPTSSKGPTQAHQGNDVHEGQNMNIQEAHEAQASASLELISPPTLLDSTQDLAQENLGSQGLLEDMVPFMVRNPTNNVDSDDYSEFSFSSQHSPPMLWTSGCSTSTSCYAVGLNSSV* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3202 328 Pfam WRKY DNA -binding domain 132 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g3202 328 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 24 299 - -
Psa3g3202 328 MobiDBLite consensus disorder prediction 200 225 - -
Psa3g3202 328 SMART WRKY_cls 131 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g3202 328 Gene3D WRKY domain 127 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g3202 328 ProSiteProfiles WRKY domain profile. 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g3202 328 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 299 IPR044810 GO:0003700
Psa3g3202 328 SUPERFAMILY WRKY DNA-binding domain 129 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3202 Psa-Chr3 270862617 270864220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3202 40 286 WRKY Transcription Factor Family AT5G43290 44.030 2.55e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa3g3202 WRKY 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3202 - - gmx:100810459 416.387