Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3169 ATGAACGTTAACATGCCAAGAGGTAAAATGAAGTTTGATGAAGATCTTGTTCCTGACCGTGAGGATGATTTTCAAACAGATGATGAAGAAAATCAAGCAGAAAGGGTTTTTGATAATTTGGATGATGATACCGAATCAGAGGTTAATAATTCACCTCCTTCCAGAAATTTATCCAATGAGGTTGACTTCAATACCTCATGGCCTCAATCCTATAGGCGATCTATGGACATGTTAACAAGTGTAAGTCAAACACCACCTGGAATTAATTTCTTCAGGATAATTGGTTTAACAGAGAAGAGTAGTTTCTCTATGGAATCCACCCAAGATGAATATTCCAATTCCTTGACTTTACCTCTTGTTTCTGACGAGAAAATTTCAATCGGAAAAGAGGAACCTACATTGAAACCTCAGCTTCGATCACATGCCAGCTGTCCAAAAGTTTCTGCCACTGAATTTTCGTCACCAGAGAGGCAAAGTTCCTTTTCACAATCAGTAATTAATGGGATCAATATATTATGTGGGATAGGGCTTATGACCATTCCATATGCAGTTAAAGAAGGAGGGTGGTTGAGCCTTCTAATACTGCTGCTGTTTGCGGTCGCTTGTTTCTATACTGGAATTTTAATGATGAGATGTTTACAAAGCTGTCCTGACCTCAAGACCTATCCAGATATTGGTCAGGCTGCATTTGGAGTTGCAGGTCGCTTGGGGATCGCGATCATTTTATACCTGGAACTATTTGGTTCTTGTGTTGAGTATATCACACTTGTCAGTGATAACCTCGCATCACTTTTCCCCAACACCGCCATGAACTTAGCTGGTACAGAGCTTAGTACACATCAAGTTTTTGGCATCACTGCAGCTCTTCTAGTTTTACCGACAGTTTGGTTGCGAGATTTAAGCCTTCTCTCATATATTTCAGCTGGAGGAATATTTGCAACAACACTTGTAGCACTTTGCTTGTTTTGGGCTGGTGCAGTAAACCGAATTGGATTTAGCAATCCTAGAACGAAATTTTTAGACATTGAAAACATATCTGTATCAATTGGTCTCTTTGGGTATGGATTTGCTGGCCATGCTGTTTTTCCAAATGTCTACTCTTCCATGAAGGATCAGTCCAAGTTCCCATTAGTTCTATATATCAGTGTTGTTTTCTCTCTTGTTATGTACTTTAGTGTAGGAGTAGTTGGATATTTACTGTTTGGTGACAAAGTTGAATCTCAGTTTACCTTAAACATGCCAAAAGAGTTATATGCATCAAAGATAGCAATCTGGACAACAGTTGTGACTCCTCTAGCAAAATATGCCTTAACATTGTTGCCGATTGTATCAAGCATAGAGGAACTTGTTCCTTTTCCTAGACTAAGATGTTATGCCATGTCTATTGTTATCAGAACAACTTTAGTTCTTGCAAGCTTAGCTGTGGCTCTCTCTTTTCCATATTTTGGTTCTGTGATGGCACTAATTGGTTCTTTGATGTCAATGATAGTTGCCCTTATTTATCCTTGTGCATGTTATCTCAAGCTACACAGTGGCAGAGTATCAAATATGCAGATAACAACTTGCATTTCGATTATTATTGCGGGGGTGATAAGCGCAATCTTAGGAACATACTCAGCTACTACAAGAATAGCTGGCAAGGGAGATTAA 1650 0.3903 MNVNMPRGKMKFDEDLVPDREDDFQTDDEENQAERVFDNLDDDTESEVNNSPPSRNLSNEVDFNTSWPQSYRRSMDMLTSVSQTPPGINFFRIIGLTEKSSFSMESTQDEYSNSLTLPLVSDEKISIGKEEPTLKPQLRSHASCPKVSATEFSSPERQSSFSQSVINGINILCGIGLMTIPYAVKEGGWLSLLILLLFAVACFYTGILMMRCLQSCPDLKTYPDIGQAAFGVAGRLGIAIILYLELFGSCVEYITLVSDNLASLFPNTAMNLAGTELSTHQVFGITAALLVLPTVWLRDLSLLSYISAGGIFATTLVALCLFWAGAVNRIGFSNPRTKFLDIENISVSIGLFGYGFAGHAVFPNVYSSMKDQSKFPLVLYISVVFSLVMYFSVGVVGYLLFGDKVESQFTLNMPKELYASKIAIWTTVVTPLAKYALTLLPIVSSIEELVPFPRLRCYAMSIVIRTTLVLASLAVALSFPYFGSVMALIGSLMSMIVALIYPCACYLKLHSGRVSNMQITTCISIIIAGVISAILGTYSATTRIAGKGD* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3169 549 MobiDBLite consensus disorder prediction 46 61 - -
Psa3g3169 549 PANTHER OS05G0424000 PROTEIN-RELATED 50 544 - -
Psa3g3169 549 Pfam Transmembrane amino acid transporter protein 158 539 IPR013057 -
Psa3g3169 549 PANTHER AMINO ACID TRANSPORTER AVT1D 50 544 - -
Psa3g3169 549 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3169 Psa-Chr3 266829528 266833492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3169 10 547 Amino Acid or Auxin Permease AAAP Family AT5G02180 50.181 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3169 K15015 - qsu:112025453 562.377