Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3162 GATTTTTGTGGAATTGCATGATGGCTGTTGGAAGCCGATTTATTCTGGAGAGGGTTCTGATGCTCCCTTGGCATCATTGGATGTACGTGGAATCAAGGAGTCCCACTTGCATATGATGTTACAAATAATTGAGATATCCTTCAAAGAATTTATTATAAGAAATGTCCAAAATGAAGTGAAGAGGAAAAATGGAGACACTGTCGAAAAACTCAAGATAGAAGTAGTTGAAATAGCCATAGACCAAGATTGCGGATTCTGCTCTCTTCTTCGGAACTCATCAGTGAAATTTGGATTCTTGTGTATCAACGGAAAGCATACCGTTGCCGGATGCGATTCGCATGGCAATAGTTTGCATTGGATTTTGATCTCCATTCTAGTTATGCACCATCATCCTGTTGCTGTTGATGTCCTCCAAGTGCGGAAACAATCTGAAGTGGGGACCAAGATCTCTCTTATTTTAAACAGCTATCTCAATCTTTGGGTTATGAAGCTGCTCCTGCAAATGTCTCACATGAGTTTGGAACAGGAAACTCTCCCACATCAAATTTCTTAG 553 0.4051 IFVELHDGCWKPIYSGEGSDAPLASLDVRGIKESHLHMMLQIIEISFKEFIIRNVQNEVKRKNGDTVEKLKIEVVEIAIDQDCGFCSLLRNSSVKFGFLCINGKHTVAGCDSHGNSLHWILISILVMHHHPVAVDVLQVRKQSEVGTKISLILNSYLNLWVMKLLLQMSHMSLEQETLPHQIS* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3162 183 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT1 1 61 - -
Psa3g3162 183 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 61 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3162 Psa-Chr3 266519688 266521014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3162 1 55 Homeobox Transcription Factor Family AT5G44180 61.818 4.31e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3162 - - gmx:100797480 105.916