Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3149 ATGTCTTTCAACCTTGTAGCAATAGTTCTTATGTTTGTGAGACTAGTAGTAGTAGCAAGTGAAGATAGCAATATCAGTTTCATCTATAATGGATTCAAATCATCACAATTGTTTCTTGATGGTGTTGCTGAATTAACCTCCAATGGATTACTTAGATTAACCAATGATACCAAACAAGAAAAGGGTCATGCTTTCTATCCAAATCCTATAGTTTTCAACAATGGAAGTAGTAGTGTGTTTTCTTTCTCAACTACTTTTGTTTTTGCTATAAGATCGGAGTTTAAAACTCTTAGTGGTCATGGAATTGTTTTTGTTCTTTCTCCAACAAAAGGGTTACCGAATTCGCGACCAAGTCAGTACCTTGGTTTGTTCAATGAAACAAACATGGGAAACAACAATAGCCATGTTTTTGGTTTAGAGCTTGATACAATTTTGAATACTGAGTTTGATGATATCAATGATAACCATGTTGGAATTGATATCAATGGATTGAAATCGGAAAAATCAGCTTCGGCGGGATATTATGAGATAGGTGGTAATGAGTTCAAGAATTTGAGCCTTTTTAGTGGCTTACCAATGCAAGTTTGGTTGGAATATGATGGTGGAAAGAAGAAGATTGATGTTACTTTAGCTCCAATTAATGTTGTTAAACCAGAAAAACCTTTGTTGTCATTGAACAAAGATCTTTCTTCTGTTATTAACAATAGTACTATGTATGTTGGATTCTCATCTTCAACAGGTTCAATTCTAACTTCTCATTATGTTCTTGGTTGGAGTTTTAAGGTTAATGGTCAAGCTCAAAGCCTCGTAATCTCAGAACTTCCAAAGCTACCATCTTTAGATGGAAAAAAGGATTCTAAGTTAATTTTCTCAATTGGGTTGCCTTTGATTTCACTATGTTTGATTCTAATGGTGGCTATAGCAATGTTTCATTTCATCAAGAGGAAGAAAATGTTCTCTGAGCTTCATGAAGATTGGGAGAAAGACTATGGAACTCAAAGATTCAAGTACAAAGATCTATACTTTGCAACAAAGGGTTTCAAGGAGAAGGAGCTATTAGGAACAGGTGGATTTGGTAGAGTCTACAAAGGTGTGATGCCAATTTCGAAACTCGAGGTAGCTGTGAAGAGAGTTTCACATGAATCAAGACAAGGGATGAAGGAATTCGTGGCGGAGATTGTTAGTATCGGTCGGCTTCGCCATAGGAATCTCGTTCCGCTTCTCGGCTATTGCAGACGAAAAGGCGAGTTACTTCTTGTTTATGATTACATGCAAAATGGAAGCTTAGACAAATATTTACACAGCAGAAAACAAAGATTTACCTTAAATTGGAGTCAAAGGTTTAGAATCATTAAAGGTGTTGCTTCTGGTTTGTTTTATTTACATGAAGAATGGGAACAAGTTGTTGTTCATAGAGATATTAAAGCTAGTAATGTTTTACTAGATGGTGAATTGAATGGAAGATTAGGTGATTTTGGTCTTTCAAGATTATATGATCATGGAACTGATCCTCAAACAACACATGTTGTTGGAACACTTGGTTATTTAGCACCTGAACATACAAGAACAGGTAAAGCTACAACAAGTTCTGATGTGTATTCTTTTGGAGCTTTTTTGCTTGAGGTTGTTTGTGGTAAAAGGCCTATTGAACAAATAAGAGAATGTGAGAGTTTGATTTTGGTTGATTATGTTTATGATTGTTGGAAAAGAGGTGAGATTGTTGAGGCTAGAGATGTAAATTTGGGTGTGGATTATGTGGTTGAAGAAGTTGAATTGGTTTTGAAACTTGGTTTGTTGTGTTCACATTGTGAGGCTTTGGCTAGGCCAAGTATGAGACAAGTTTTGAGGTATTTGGAGAGGGATTTGGAACTTCCTGATTTGTCTTTTCTTAGTTTGTCTTCAATGGGAGTGACTTCTGGACAATGTGAAAATTTTCAAGATTTTGGTATGTCTTATGCTTCTTCTTCTATGGATAGACCATTCTCTCATACTTCTTCAATTGCTGAATCACTTCTTTCTGGTGGTAGATAG 2031 0.3575 MSFNLVAIVLMFVRLVVVASEDSNISFIYNGFKSSQLFLDGVAELTSNGLLRLTNDTKQEKGHAFYPNPIVFNNGSSSVFSFSTTFVFAIRSEFKTLSGHGIVFVLSPTKGLPNSRPSQYLGLFNETNMGNNNSHVFGLELDTILNTEFDDINDNHVGIDINGLKSEKSASAGYYEIGGNEFKNLSLFSGLPMQVWLEYDGGKKKIDVTLAPINVVKPEKPLLSLNKDLSSVINNSTMYVGFSSSTGSILTSHYVLGWSFKVNGQAQSLVISELPKLPSLDGKKDSKLIFSIGLPLISLCLILMVAIAMFHFIKRKKMFSELHEDWEKDYGTQRFKYKDLYFATKGFKEKELLGTGGFGRVYKGVMPISKLEVAVKRVSHESRQGMKEFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMQNGSLDKYLHSRKQRFTLNWSQRFRIIKGVASGLFYLHEEWEQVVVHRDIKASNVLLDGELNGRLGDFGLSRLYDHGTDPQTTHVVGTLGYLAPEHTRTGKATTSSDVYSFGAFLLEVVCGKRPIEQIRECESLILVDYVYDCWKRGEIVEARDVNLGVDYVVEEVELVLKLGLLCSHCEALARPSMRQVLRYLERDLELPDLSFLSLSSMGVTSGQCENFQDFGMSYASSSMDRPFSHTSSIAESLLSGGR* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3149 676 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Psa3g3149 676 Gene3D - 23 275 - -
Psa3g3149 676 Pfam Protein kinase domain 347 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3149 676 SMART serkin_6 347 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3149 676 ProSiteProfiles Protein kinase domain profile. 347 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3149 676 CDD lectin_legume_LecRK_Arcelin_ConA 25 264 IPR001220 GO:0030246
Psa3g3149 676 Gene3D Transferase(Phosphotransferase) domain 1 424 631 - -
Psa3g3149 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 280 IPR013320 -
Psa3g3149 676 Pfam Legume lectin domain 25 274 IPR001220 GO:0030246
Psa3g3149 676 PANTHER - 3 671 - -
Psa3g3149 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Psa3g3149 676 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 3 671 - -
Psa3g3149 676 SUPERFAMILY Protein kinase-like (PK-like) 329 629 IPR011009 -
Psa3g3149 676 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Psa3g3149 676 CDD STKc_IRAK 353 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3149 Psa-Chr3 265863998 265866828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3149 20 676 Receptor kinase-like Gene Family AT2G37710 62.632 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa3g3149 Pkinase 9.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3149 - - gmx:100802293 1007.67