Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3148 ATGCAATTGCAAACCCATCTCAAACTCATCATATCATTTTCATTATTACTCTTTATTCCATCTTTTTCCCAAATTGACCAACTCTTATATGCAGGATTCAAGAACATTGATCCTAAAAATCTCACCTTGAATGGAATTTCCGAGATACAGAAAAATGGAATACTAAGATTAACAAATGAAACAAGCAGATTAATGGGTCATGCCTTTTACCCTTTACCTTTCCAACTAAAGAACAAAACAACCGGTAAAGTTTTCTCCTTTTCTTCGTCTTTTGCTCTTGCTGTTGTTCCTGAATATCCTAAACTTGGTGGTCATGGCATGGCTTTCACAATAGCACCTACAAAAGATCTCAAAGCTTTACCTAGTCAGTATCTTGGTCTTTTCAATTCAAGCGATGTTGGTAATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACTGTTCAAGATTTTGAGTTTGGTGATATTAATGATAATCATGTTGGAATAAACATCAATAGTATGATGTCAAATGCTTCTGTTAAAGCTGGTTATTACAATGATGATTCGGTTTTTCAAGATCTTAATATTAAAGGTGGAAAAGCTATTCTAGTTTGGGTTGATTATGATTCTTTGATGAATGTTGTTAGTGTTACACTTTCTCCAACTTCAAACAAACCTAAAAAACCAACCTTGTCTTTTCATATGGATTTATCGCCTATTCTTCATGATACTATGTATGTTGGTTTCTCTGCTTCAACTGGTTTACTTGCTAGCTCTCATTATCTTTTGGGTTGGAGTTTCAAAATCAATGGACCAACACCTTTTCTTGATTTGTCTTCACTACCACAGCTTCCACAGCCAAAGAAGAAACAAACTTCTTTGATAACCGGTGTTTCGGTTGCGGCTTCTGTTATTGTGTTGGGTTCTATAGCATTTGGTTTTTACCTTTTCAGAAAAATCAAGAATGCTGATGTTATAGAAGCATGGGAGCTGGAAGTTGGGCCTCATAGATACTCTTATCAAGAGCTTAAGAAAGCTACAAAAGGTTTCAAGGAGAAAGGGTTACTCGGGCAGGGTGGTTTTGGAAGAGTTTATAAAGGGACGATGCCGAAATCAAAGATCCAAGTGGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGGTTGAGGGAATTTGTGTCGGAAATCGCAAGCATAGGCCGGCTTCGCCACCGGAATTTGGTTCAGTTACTCGGCTGGTGTCGTCGCAGAGGAGACCTTTTACTTGTGTACGATTTCATGGCGAATGGAAGCTTAGACAAGTACTTGTTTGAAGATTCAGAATTTGTGCTGAGCTGGGAACAAAGGTTTAAGATAATAAAGGGTGTTGCTTCGGGTCTTTTATATCTTCATGAAGGTTATGAGCAAGTGGTAATACATAGAGATGTTAAAGCTAGTAACGTGCTGTTAGATTTCGAACTCAATGGAAGATTAGGTGATTTTGGTTTGGCAAGGTTGTATGAACATGGTGCTAATCCAGGCACAACAAGAGTGGTGGGAACATTAGGCTATTTAGCGCCGGAGTTGCCTAGAACAGGAAGAGCAACAACAAGCTCCGACGTTTTTGCATTTGGCGCGCTTCTGCTCGAGGTTGCTTGCGGAAGAAGGCCTATTGAACCAAAGGCATTACAAGAAGAGTTAGTGTTGGTGGATTGGGTTTGGGAAAGGTTCAAAGAAGGAAGAGCACTTGAAGTAGTGGATCCTAAATTGAATGGTAATTTTGATGAAAGTGAAGTAATGATGGTGTTGAAATTGGGATTGATATGTTCAAATGATGTTCCTACTATAAGGCCTAGCATGAGACAAGTAGTGAGGATTTTGGATGGAGAAGTTGAGTTGCCAAATGAAATGATGAAAGTGAAGCCTAGCATGAGACAAGTAGTGAGGATTTTGGATGGAGAAGTTGAGTTGCCAAATGAAATGAGAAAGCCAGGAGGTATTGATTCACAAGAGGGGTTTGATGAATTCTTGCATTCTCTTGGAACTACTTCATTTGATAAGACAAATTCAAGCTCCTATGTTGGAAATACAGACATGAATACTAGTTTTATCTCTTTTGGTAATTCACCTTAA 2094 0.3835 MQLQTHLKLIISFSLLLFIPSFSQIDQLLYAGFKNIDPKNLTLNGISEIQKNGILRLTNETSRLMGHAFYPLPFQLKNKTTGKVFSFSSSFALAVVPEYPKLGGHGMAFTIAPTKDLKALPSQYLGLFNSSDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGININSMMSNASVKAGYYNDDSVFQDLNIKGGKAILVWVDYDSLMNVVSVTLSPTSNKPKKPTLSFHMDLSPILHDTMYVGFSASTGLLASSHYLLGWSFKINGPTPFLDLSSLPQLPQPKKKQTSLITGVSVAASVIVLGSIAFGFYLFRKIKNADVIEAWELEVGPHRYSYQELKKATKGFKEKGLLGQGGFGRVYKGTMPKSKIQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFEDSEFVLSWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGANPGTTRVVGTLGYLAPELPRTGRATTSSDVFAFGALLLEVACGRRPIEPKALQEELVLVDWVWERFKEGRALEVVDPKLNGNFDESEVMMVLKLGLICSNDVPTIRPSMRQVVRILDGEVELPNEMMKVKPSMRQVVRILDGEVELPNEMRKPGGIDSQEGFDEFLHSLGTTSFDKTNSSSYVGNTDMNTSFISFGNSP* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3148 697 CDD lectin_legume_LecRK_Arcelin_ConA 27 265 IPR001220 GO:0030246
Psa3g3148 697 Pfam Protein kinase domain 344 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3148 697 PANTHER - 9 624 - -
Psa3g3148 697 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Psa3g3148 697 SUPERFAMILY Protein kinase-like (PK-like) 326 622 IPR011009 -
Psa3g3148 697 Gene3D - 27 265 - -
Psa3g3148 697 ProSiteProfiles Protein kinase domain profile. 344 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3148 697 SMART serkin_6 344 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3148 697 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 9 624 - -
Psa3g3148 697 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Psa3g3148 697 CDD STKc_IRAK 350 616 - -
Psa3g3148 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Psa3g3148 697 Pfam Legume lectin domain 28 274 IPR001220 GO:0030246
Psa3g3148 697 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 283 IPR013320 -
Psa3g3148 697 Gene3D Transferase(Phosphotransferase) domain 1 421 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3148 Psa-Chr3 265727241 265729390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3148 23 621 Receptor kinase-like Gene Family AT3G55550 62.706 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa3g3148 Pkinase 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3148 - - gmx:100784346 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3148 3 265727241 265729390 Psa3g3148 3 265727241 265729390 ECH