Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3147 ATGTTCCTCAAATTTATGTTGTTGTTTTCCTTTATTACATTGGGAGCAAGTAAAGATATCAGTTTCACCTATAATGGATTCCAATCATCTTATTTGTATGTTGATGGTATTGCCGAGTTAGCCTCCAATGGGTTACTCAGAATCGCCATTGACACCAAACAAGAAAAAGCACATGCTTTCTATCCAAATCCTATAGTTTTCAAAAACAATTCTAATGGAAGTGTTTCTTCTTTCTCAACCACTTTTGTATTTGCCATTAGACCTGAACCTGACTATCCAACTCTTAGTGGTCATGGAATTGTCTTTGTTGTTTCTCCAACAAAAGGGTTGCCAAATTCACTACCAAGTCAGTACCTTGGTCTCTTTGACAAATACAACAATGGAAACAGTAGCAACCATGTTTTTGGGGTGGAACTTGATACTATTCAAAGCAGTGAGTTTAATGATATCAATAATAACCATGTTGGTATTGATATCAATGATTTGAAATCAGTTAGTTCAGCTCCGGCAGGATATTATGATAGCAATGGTCAACTCAAGGATTTGACCCTTATCAGTGGCTATCCTATGCAGGTATGGATTGAATATGATGGTGAGAAGAAGAAGATTGATGTTACTTTAGCTCCTATTGATGTTGTTAAACCAAAACAACCTTTGTTGTCGTTTGTCAAAGATCTTTCTCCAATTCTTAACAATAGTATGTATGTTGGATTTTCATCAGCTACTGGATCAGTTTATACTTCTCATTATATTCTTGGTTGGAGTTTTAAGGTTAATGGTCAAGCTCAAAACCTTGTGATTTCTGAACTTCCTAAGCTACCAAGATTTGGTGAGAAAAAAGAATCCAGATTTCTAACTGTTGGGTTACCTTTGCTTTTGCTAAGTTTGGTTTTCATGATAACTTTAGGGGTTATTTATTATATAAAAAGGAAGAAGAAATTTGCTGAGTTGCTTGAAGATTGGGAACATGAGTATGGCCCACATAGATTTAAGTTCAAAGATCTATACTTTGCCACAAAGGGTTTCAGGGAAAAGGGGCTACTGGGAGTTGGTGGATTTGGTAGAGTCTACAAAGGTGTGATGCCAGGTTCCAAACTTGAGGTTGCTGTGAAGAGGGTGTCTCATGAATCAAGACAAGGAATTAAGGAATTTGTGTCGGAAATTGTTAGTATTGGTCGTCTTCGTCACAGGAATCTTGTTCCACTTCTTGGCTGTTGCAGGCGAAAAGGTGAGTTACTTCTGGTCTACGATTACATGCCTAATGGGAGCTTAGACACCTATCTATACAACCAACCAAAAATGAGCTTGAATTGGAGTCAAAGATTCACAATCATAAAAGGTGTTGCTTCGGGTTTGTTTTATCTGCACGAAGGATGGGAGCAAGTTGTGATTCATAGAGACATAAAAGCTAGTAATGTGTTATTAGATGCAGAATTGAATGGTAGATTGGGAGATTTTGGTCTTGCAAGGTTGTATGATCATGGTGCTGATCCTGACGCAACTCATTTGGTTGGAACTGTGGGGTATCTATCTCCGGAGCATATTAGAACAGGTAAAGCAACAAAATTTTCTGATGTGTTTGCTTTTGGTGCATTTCTTCTTGAAGTTGTTTGTGGAAGGAAGCCTATAGATCAGGTAGGGGAAAATGAGAGTGTAATTCTTGTTGATTGTGTCTTTGAGTGTTGGAAAAGAGGTGGGATTCTTGAGGCAAAGGATGTAAATTTGGGAACAGATTATGTGTCTGAAGAGGTTGAGTTGGTGTTGAAACTTGGCTTGTTGTGTTCAATTTCAGAACCTTTGGCTAGACCAAATATGAGGCAAGTTGTGCAGTATTTGGAGATGGATATACCTTTGCCGGATTTGTCTTTGCTTAGTTTATCTTCTTCTGGACTTACTTTTGGGTACTAA 1908 0.3784 MFLKFMLLFSFITLGASKDISFTYNGFQSSYLYVDGIAELASNGLLRIAIDTKQEKAHAFYPNPIVFKNNSNGSVSSFSTTFVFAIRPEPDYPTLSGHGIVFVVSPTKGLPNSLPSQYLGLFDKYNNGNSSNHVFGVELDTIQSSEFNDINNNHVGIDINDLKSVSSAPAGYYDSNGQLKDLTLISGYPMQVWIEYDGEKKKIDVTLAPIDVVKPKQPLLSFVKDLSPILNNSMYVGFSSATGSVYTSHYILGWSFKVNGQAQNLVISELPKLPRFGEKKESRFLTVGLPLLLLSLVFMITLGVIYYIKRKKKFAELLEDWEHEYGPHRFKFKDLYFATKGFREKGLLGVGGFGRVYKGVMPGSKLEVAVKRVSHESRQGIKEFVSEIVSIGRLRHRNLVPLLGCCRRKGELLLVYDYMPNGSLDTYLYNQPKMSLNWSQRFTIIKGVASGLFYLHEGWEQVVIHRDIKASNVLLDAELNGRLGDFGLARLYDHGADPDATHLVGTVGYLSPEHIRTGKATKFSDVFAFGAFLLEVVCGRKPIDQVGENESVILVDCVFECWKRGGILEAKDVNLGTDYVSEEVELVLKLGLLCSISEPLARPNMRQVVQYLEMDIPLPDLSLLSLSSSGLTFGY* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3147 635 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Psa3g3147 635 CDD STKc_IRAK 348 613 - -
Psa3g3147 635 Gene3D - 18 270 - -
Psa3g3147 635 Gene3D Transferase(Phosphotransferase) domain 1 419 616 - -
Psa3g3147 635 PANTHER - 7 633 - -
Psa3g3147 635 CDD lectin_legume_LecRK_Arcelin_ConA 20 260 IPR001220 GO:0030246
Psa3g3147 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Psa3g3147 635 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Psa3g3147 635 SUPERFAMILY Protein kinase-like (PK-like) 317 614 IPR011009 -
Psa3g3147 635 Pfam Protein kinase domain 343 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3147 635 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 7 633 - -
Psa3g3147 635 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3147 635 ProSiteProfiles Protein kinase domain profile. 342 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3147 635 Pfam Legume lectin domain 20 270 IPR001220 GO:0030246
Psa3g3147 635 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 278 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3147 Psa-Chr3 265575389 265577296 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3147 16 634 Receptor kinase-like Gene Family AT2G37710 65.113 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa3g3147 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3147 - - adu:107484540 929.087