Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3145 ATGTCAATTCATCTTCAATTCTTGATATCAGTTTTGCTATTCCTCTCTGTGCCAGTATTATCCCAAATTGACCAGCTCATGTATGTTGGATTCAAGGATGCTGGTCCCAACAATTTAACCTTGAATGGAACTGCAGAGATAGATAAAAACGGCATCATAAAGTTAACAAATGAAACAAGCAATTTAACCAGTAAAATTGTTGGTCAAGCTTTTTACTCTCAGTCTTTTCAGCTAAAGAACTCAACAACCGGTAAAGCTTTCTCCTTTTCTTCCTCGTTTGCTCTTGCTTTTGTTCACAAGTATCCAAGTGGTGGTCATGGGATCAGCTTCTCAATAGTAACTTCTAAAGATTTATCATATGACACTGGTAATTCTTCTAACCATAGTTTTGATGTTGAGATTTACACCGTTCTAGACTATGAGCGTAGTGATAACCATGTTGTAATAGACACCGTTCCATACTATCATTCAACACTGCAAGAAAGTAATTTCAAAAGTGGGAAACCATTTCTTGTTTGGGTTGATTATGACTCTTCACATAATCTCGTTAGTGTTACACTTTCATTAACTTCAATCAAACCTCAAAAACCAAATTTGTCCTTTCATAAGGATCTATCACCTATCCTTCATGATATTATGTATGTTGGATTTTATGCTTCAACTTGGCCGCCGGAGATCTCTTATTACATTTTGGGTTGGAGCTTTAAAATCAATGGACCAGCACCATTTCTTGATTTGACTTCACTTCCACAATTTCCACAACCAAAGAAAAAACAAACTTCTTTGATAGTTGGTGTTTCTGTTACTGCGTTGTGTTTCATAGCATTTGGTATTTACGTACTCAGAAAAATCATGAATGCTGATGTGATAGAAACATGGGAGCTTGAAATTGGGCCACATAGATACTCCTATCTAGAGCTCAAGAAAGCTACAAAAGGTTTCCAAGAGAAAGAGTTACTTGGGCAGGGTGGTTTCGGAAAAGTTTACAAAGGGACATTATCGAAATCAAGTATCCAAGTGGCCGTTAAAAGAGTTTCACATGAATCAAAACAAGGATTGAGGGAATTTGTGTCGGAAATCGCCACCATAGGCCGGCTTCGCCACCGGAATTTGGTTCAATTACTTGGATGGTGTCGTCGCAGAGGAGACCTTTTACTTGTGTACGATTTCATGGCGAATGGAAGCTTAGACAAGTATTTGTTTAAAGATTCAAAATTTGAGCTAAGTTGGGAAAAAAGGTTTAAGATAATAAAAGGTGTTGCTTCAGGTCTTTTGTTTCTACATGAAGGGTATGAGCAAGTGGTAATACACAGAGATGTTAAGGCTAGCAATGTGCTTTTAGATTTTGAATTCAATGGAAGATTAGCTGATTTTGGTTTGTCAAGATTGCATAAACATGGTGGTAATCCAGGCACAACAAGAGTGGCGGGAACATTTGGCTATTTGGCACCAGAGTTGCCTAGAACAGGAAAGCCATCTACATGTTCTGATGTTGCTTGTGAAGAAGGCCCATTGAACCAAAGGCATTACCAGAAGAATTGGTGTGGTGGATTGGGTGTGGGAAAGTACAAAGAAGGAAGAGTACTTGAAGTAGTAGACCCTAAATTGAATGGTGATGAAAGTGAAGTAATGATGGTGTTGAAATTGGGATTGATATGTTCAAATGATGTTCCTACTATAAGGCCTAGCATGAGACAAGTAGTGAGGATTTTGGATGGAGAAGTTGAGTTGCCAAATGAATTGAGACAGCCAAGAGATATTGAATCACAGGAGGGGTTTGATGAATTTTTGCGTTGTCTTGAAACTTCTTCATTTGATCAAACGAGTTCAAGCTCCTATCTTGGAATTAGAGACATGAATACTAGGTTTGTCTCTTCTGCTAAATGGTAG 1890 0.381 MSIHLQFLISVLLFLSVPVLSQIDQLMYVGFKDAGPNNLTLNGTAEIDKNGIIKLTNETSNLTSKIVGQAFYSQSFQLKNSTTGKAFSFSSSFALAFVHKYPSGGHGISFSIVTSKDLSYDTGNSSNHSFDVEIYTVLDYERSDNHVVIDTVPYYHSTLQESNFKSGKPFLVWVDYDSSHNLVSVTLSLTSIKPQKPNLSFHKDLSPILHDIMYVGFYASTWPPEISYYILGWSFKINGPAPFLDLTSLPQFPQPKKKQTSLIVGVSVTALCFIAFGIYVLRKIMNADVIETWELEIGPHRYSYLELKKATKGFQEKELLGQGGFGKVYKGTLSKSSIQVAVKRVSHESKQGLREFVSEIATIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFKDSKFELSWEKRFKIIKGVASGLLFLHEGYEQVVIHRDVKASNVLLDFEFNGRLADFGLSRLHKHGGNPGTTRVAGTFGYLAPELPRTGKPSTCSDVACEEGPLNQRHYQKNWCGGLGVGKYKEGRVLEVVDPKLNGDESEVMMVLKLGLICSNDVPTIRPSMRQVVRILDGEVELPNELRQPRDIESQEGFDEFLRCLETSSFDQTSSSSYLGIRDMNTRFVSSAKW* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3145 629 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 239 IPR013320 -
Psa3g3145 629 PANTHER - 6 619 - -
Psa3g3145 629 Pfam Protein tyrosine and serine/threonine kinase 316 498 IPR001245 GO:0004672|GO:0006468
Psa3g3145 629 ProSiteProfiles Protein kinase domain profile. 314 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3145 629 Gene3D Transferase(Phosphotransferase) domain 1 391 583 - -
Psa3g3145 629 Pfam Legume lectin domain 26 248 IPR001220 GO:0030246
Psa3g3145 629 ProSitePatterns Protein kinases ATP-binding region signature. 320 343 IPR017441 GO:0005524
Psa3g3145 629 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 6 619 - -
Psa3g3145 629 SUPERFAMILY Protein kinase-like (PK-like) 291 571 IPR011009 -
Psa3g3145 629 CDD lectin_legume_LecRK_Arcelin_ConA 28 239 IPR001220 GO:0030246
Psa3g3145 629 Gene3D Phosphorylase Kinase; domain 1 299 390 - -
Psa3g3145 629 SMART serkin_6 314 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3145 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Psa3g3145 629 Gene3D - 25 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3145 Psa-Chr3 265541198 265543118 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3145 19 604 Receptor kinase-like Gene Family AT3G55550 48.678 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa3g3145 Lectin_legB 5.1e-39 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3145 - - gmx:100784346 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3145 3 265541198 265543118 Psa3g3145 3 265541198 265543118 ECH