Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3143 ATGAAACCTATCATCATGCCAATTCATCTTCAATTCTTCATATCACTTTTTCTGTTCCTTTCTCTGCCAGTTTTATCCGAACTTGACCACCTCATGTATGCAGGATTCAAGGATGTTGGTCCCAACAATCTAACCTTGAATGGAATCGCAGAGATAGAGAAAAACGGCATCATAAAGTTAACAAATGAAACAAGCAAATTAATGGGCCATGCTTTTTACTCTCAACCTATCAAACTAAAGAACTCAACAACCGGTAAAGCTTTCTCCTTTTCTTCATGTTTTGCAATTGCTATTGTTCCTGAGTATCCTAAACTTGGTGGTCACGGCATGGCTTTCGCAATAGCACCTACAAAAGATCTCAAAGCTTTACCTATTCAGTATCTTGGTCTTTTCAATTCAAGCGATGTTGGCAATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACTGTTCAAGACTTTGAGTTTGGTGATATTAATGATAACCATATCGGAATCGACATCAATAGTTTGCAGTCAAATGCATCTATTAATGCAAGCTATTACACTGATGATTCAAGATTACAATATCTTAATCTTAAAAGTGGGAAACCGATTCTTGTTTGGGTTGATTATGATTCTTCGCGGAATCTTATTAGTGTTACACTTTCTCCAACTTCAACCAAACCGAAAAAACCAACCTTGTCTTTTCATATGGATCTGTCACCTATTTTTCATGATACTATGTATCTTGGTTTCTCTGCTTCAACTGGTTTACTTTCTAGCTCTCATTATGTTTTGGGTTGGAGTTTCAAAATCAATGGACCAGCACCATTTCTTGATTTGTCTTCACTACCACAGCTTCCACAGCCAAAGAAGAAACAAACTTCTTTGATAATTGGTGTTTCGGTCACTGCTTCTGTAATTGTATTGTGTTCGATAGCTATTTCTATTTACCTTTTCAGAAAAATCATGAATGCTGATGTAATTGAAGCATGGGAGCTTGAAATTGGGCCACATAGATACTCCTATCAAGAGCTTAAGAAAGCTACAAAAGGCTTCAAGGAGAAAGAGTTACTCGGGCAGGGCGGTTTCGGAAGAGTTTACAAAGGGACATTTCCTAAATCAAAAGTCCAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGTCTGAGAGAATTTGTGTCGGAAATAGCAAGCATAGGCCGGCTTCGCCATAGAAATTTGGTTCCGTTACTCGGATGGTGTCGTCGTAGAGGCGACCTTTTACTTGTATACGATTTAATGGCAAATGGAAGCTTAGATAAGTATTTGTTTGAAGATTCAGAAATTGTGCTAAGTTGGGAACAAAGGTTTAAGATAATAAAGGGGGTTGCTTCGGGTCTTTTGTTTCTACATGAAGGGTATGATCAAGTGGTAATACATAGAGATGTTAAAGCTAGCAATGTGCTGTTAGATTTTGAACTCAACGGAAGATTAGGTGATTTTGGATTGGCAAGGTTATATGAACATGGTGCTAATCCAGGAACCACAAGAGTGGTAGGAACATTAGGCTATTTGGCACCAGAGTTGCCTAGAACAGGAAAGGCTTCTACAAGCTCTGATGTTTTTGCATTTGGCGCGCTTCTGCTCGAGGTTGCTTGTGGAAGAAGGCCTATTGAACCAAAGGCATTACAAGAAGAGTTAGTGTTGGTGGATTGGGTGTGGGAAAGGTTGGAAGAAGGAAGAGTACTTGAAGTAGTGGATCCTAAAATCAATGGTGATTTTGTTGAAAGTGAGGTAATGATGGTGCTGAAGTTAGGATTGATATGTTCAAATAATGTTCCTACTATAAGGCCTAACATGACACAAGTGGTGAGGATTTTGGATGGAGAAGTTGAGTTACCAAATGAAATGAGAAAGCCAGGAGGTATTGAACCACAAGAGGGATTTGATGAATTCTTGCATTCTCTTGGAACTACTTCTTCTTTTGATAAGACCAATTCAAGCTCTCATGTTGTAAATAAAGACAAGAATAGTACCTCTTATGCCAATTCACCTAAATAA 2031 0.3831 MKPIIMPIHLQFFISLFLFLSLPVLSELDHLMYAGFKDVGPNNLTLNGIAEIEKNGIIKLTNETSKLMGHAFYSQPIKLKNSTTGKAFSFSSCFAIAIVPEYPKLGGHGMAFAIAPTKDLKALPIQYLGLFNSSDVGNFSNHLFAVEFDTVQDFEFGDINDNHIGIDINSLQSNASINASYYTDDSRLQYLNLKSGKPILVWVDYDSSRNLISVTLSPTSTKPKKPTLSFHMDLSPIFHDTMYLGFSASTGLLSSSHYVLGWSFKINGPAPFLDLSSLPQLPQPKKKQTSLIIGVSVTASVIVLCSIAISIYLFRKIMNADVIEAWELEIGPHRYSYQELKKATKGFKEKELLGQGGFGRVYKGTFPKSKVQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVPLLGWCRRRGDLLLVYDLMANGSLDKYLFEDSEIVLSWEQRFKIIKGVASGLLFLHEGYDQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGANPGTTRVVGTLGYLAPELPRTGKASTSSDVFAFGALLLEVACGRRPIEPKALQEELVLVDWVWERLEEGRVLEVVDPKINGDFVESEVMMVLKLGLICSNNVPTIRPNMTQVVRILDGEVELPNEMRKPGGIEPQEGFDEFLHSLGTTSSFDKTNSSSHVVNKDKNSTSYANSPK* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3143 676 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Psa3g3143 676 Pfam Protein kinase domain 347 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3143 676 CDD STKc_IRAK 353 619 - -
Psa3g3143 676 SMART serkin_6 347 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3143 676 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 11 665 - -
Psa3g3143 676 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 286 IPR013320 -
Psa3g3143 676 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Psa3g3143 676 SUPERFAMILY Protein kinase-like (PK-like) 329 624 IPR011009 -
Psa3g3143 676 MobiDBLite consensus disorder prediction 651 676 - -
Psa3g3143 676 CDD lectin_legume_LecRK_Arcelin_ConA 33 268 IPR001220 GO:0030246
Psa3g3143 676 Pfam Legume lectin domain 32 278 IPR001220 GO:0030246
Psa3g3143 676 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3143 676 Gene3D Transferase(Phosphotransferase) domain 1 424 631 - -
Psa3g3143 676 Gene3D - 31 267 - -
Psa3g3143 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Psa3g3143 676 PANTHER - 11 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3143 Psa-Chr3 265453314 265455763 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3143 24 659 Receptor kinase-like Gene Family AT3G55550 58.168 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Psa3g3143 Pkinase 9.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3143 - - gmx:100784346 1004.97