Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3132 ATGCGCCACCGCCACAAGTTCCGTGGAGTGAGACAATGGCCGTGGGGAAAGTGGGCAGCTGAGATCCGAGACCCTGTCCAACGGAAACGTCTCTGGCTTGGAACATTTAATTCTGCCGAAGAAACCGCCGCCGAGTACGACAGAGTTGCTGTGATGCTGAGAGGTTCTGACGTCGCTACCAACTTTCCTATTTTACAGGCGAAGGCGGAACTGGAAACTGAAGTACCACCGCCGGTGAATGGCGGAAATGACGGCGGATCTGGCGGAGGCGACGCCTATGGTGAGGGAGAACTCTATTTGTAA 303 0.5512 MRHRHKFRGVRQWPWGKWAAEIRDPVQRKRLWLGTFNSAEETAAEYDRVAVMLRGSDVATNFPILQAKAELETEVPPPVNGGNDGGSGGGDAYGEGELYL* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3132 100 PIRSF PTI6 1 98 IPR017392 GO:0003700
Psa3g3132 100 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2 3 66 - -
Psa3g3132 100 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Psa3g3132 100 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Psa3g3132 100 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Psa3g3132 100 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Psa3g3132 100 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Psa3g3132 100 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 66 - -
Psa3g3132 100 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Psa3g3132 100 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Psa3g3132 100 MobiDBLite consensus disorder prediction 73 100 - -
Psa3g3132 100 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3132 Psa-Chr3 264064638 264064940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3132 6 69 AP2-EREBP Transcription Factor Family AT4G23750 65.625 3.42e-26 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Psa3g3132 AP2 3.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3132 - K13434 gmx:100794593 105.916