Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3126 ATGACAGAATATGTTGTGACTCGTTGGTACAGAGCCCCTGAATTACTACTGAACTGTTCAGAATATGCTGCTGCTATTGATGTATGGTCAGTTGGTTGCATTTTGATGGAGATAATTAGAAAGGAGCCTCTATTTCCTGGTAAAGATTATGTTCAGCAGTTGGCGCTCATAACTGAGTTGTTATGTTCACCAAATGAAGAAGATCTTGGATTCCTTAGAAGTGATCATGCAAAGAAATATGTTAAGCAACTTCCGTATGTAGAAGAGTAG 270 0.3852 MTEYVVTRWYRAPELLLNCSEYAAAIDVWSVGCILMEIIRKEPLFPGKDYVQQLALITELLCSPNEEDLGFLRSDHAKKYVKQLPYVEE* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3126 89 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 1 88 - -
Psa3g3126 89 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3126 89 Pfam Protein kinase domain 1 61 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3126 89 Gene3D Transferase(Phosphotransferase) domain 1 6 87 - -
Psa3g3126 89 SUPERFAMILY Protein kinase-like (PK-like) 1 76 IPR011009 -
Psa3g3126 89 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3126 Psa-Chr3 263529252 263529559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3126 1 89 MAP Kinase Gene Family AT1G07880 78.652 5.61e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Psa3g3126 Pkinase 9.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3126 K04371 - gmx:100786314 168.703