Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3125 ATGACAGAATATGTTGTGACTCGTTGGTACAGAGCCCCTGAATTACTACTGAACTGTTCAGAATATGTTGCTGCTATTGATGTATGGTCAGTTGGTTGCATTTTGATGGAGATAATTAGAAAGGAGCCTCTATTTCCTGGTAAAGATTATGTTCAGCAGTTGGCGCTCATAACTGAGTTGTTAGGTTCACCAAATGAAGAAGATCTTGGATTCCTCAGAAGTGATAATGCAAAGAAATATGTTAAGTAG 249 0.3815 MTEYVVTRWYRAPELLLNCSEYVAAIDVWSVGCILMEIIRKEPLFPGKDYVQQLALITELLGSPNEEDLGFLRSDNAKKYVK* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3125 82 ProSiteProfiles Protein kinase domain profile. 1 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3125 82 Pfam Protein kinase domain 1 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g3125 82 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 82 - -
Psa3g3125 82 SUPERFAMILY Protein kinase-like (PK-like) 1 73 IPR011009 -
Psa3g3125 82 Gene3D Transferase(Phosphotransferase) domain 1 6 82 - -
Psa3g3125 82 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3125 Psa-Chr3 263511424 263511924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3125 1 82 MAP Kinase Gene Family AT1G07880 82.927 3.21e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Psa3g3125 Pkinase 9.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3125 K04371 - gmx:100786314 163.31