Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3112 ATGGAAGCTTCTTCAATAACAGAACTGTTGAAGGACTTTTGTGATACTATGCCATGGCAGTATGCTGTCTTTTGGAAGCTTAACCACCTTTCTCCAATGACATTGAACTGGGAAAGTGGTTACCAGAAAAGTAATGAGCCTTTGGGGAGTATGTGGGGGGACATCAATTTCGAATCCGTAGAAGATGTATATTCTTCAAGGACTGAAGGAACTGATGATGTAGGTGATTATTCAGTTCGACTTCTCATGATCGAAATGTCTCATCGTAAATACAGTTTGGGAGAAGGGGTTGTTGGTAAATCAGCTCTTGCCAAGGAACATTGTTGGGTTTCCAGCGAGGATATTTTCACCGGTAAATTTGACACTAGTTTGCTTCCTGAGTGTCCCGACGAGTGGCTTCTTCAGTTTGCTTCTGGCATCAAGACTATTGTGCTGGTTCCAGTTCTTCCACAAGGGGTTTTGCAGTTCGGTTCATTTAAAGGAGTTGCTGAAGACCGAGAATTTGTTGCAAATATCAAAGAGAAATTTCATTTCATTCATTCTATGGAAGCTAATACCACAGCTTTGAACTATGGAATTGATTCTCAAGATTGGTCATTCTCAGATCTATCAAATTATTTGATGGATAGCATCGATGAATCTTCTGCAGCTAGTACTTCTCTCAATATGAACGAATCGGCCAGATTTTCTCAGGATGAGTATTTGTTCTCCAGAGAAACTCAGCTAAAATCTCTCAAAAGAGCCAATGAAAATCAGATGTTTTCCTCATCATTCGAGGCGTCAACTGATCTAACACATATCAGTTATGTGGAGACAAAGCCAAATCATCTGGTAGAAGAGATATGGCCCTGGTCTCAATTTGTAGGCAATGAAGAAAAGTTCGGAGAGACATCTTATGGATTAAGTTCTTATTCTGATAATAATTTGACTGGTCATGTTAACGTTAAGAATTTCAATGACTTCTCTTCTGTCCCCTCAGTGTCTGCATTCCACAAAGCAGTTGGGTCTGTTGCGTATCGAAATATCTTGGACGAGGATACATTCAGTAGCTCGACTTTAATATCCAATAAAAAGGAGCATGATCATATCACGAGTTTTGAGCTTCATGAAGGACTCGAACCAGAATATCTTTTGGATGCTGTTGTTGGCGATTTATACAGTGCCTCCGATGATACCTCGTGTAGATCCAACAGTTTTAGGTCTCATATAACAATGCCGTCAGAGTTTACTGGCTCCATTCAGCCGAAAATCACATCTGTAGAAAGAACTGCCTTTGTGAAAAACTCAGATGTTGGAAGTGGTCTTATGCCTGCGGTTACAACCAATGCGAAAGACATATTTGCGTCATCTTTCGATGGAAATTCAAGTTTATTGGTTGATGAGGCACCACGGGAACCGGTTAATAATCATGTGGTTCCTATTAGTCGACCAAAGCTCTCTAGTGTGAGCAAGAAAAGAGCAAAAGTAGGCAACAAGAAAAATTCAAGGCCAAGAGATAGACAATTGATCATGGACAGGATGAAGGAGTTGAGGGAACTCATCCCGGATGGTGGAAGGTGTAGCATTGACAACCTTTTGGAACGAACCGTAAAGCACATGATGTACTTAAGAATGGTAACTAGCCACGCCGAGAAACTGAAACGATTTGTTGATCGTGAGGATTTACAGGTACCTGAAAGGAAAAGGAAGAAAACAAATGGCAGCTATCCAGGAAGAAGCTGTGCATTTGACTTAGAAAGTGAACAGTCATGGCCCATAGTCATAGAAGATCTCGAATCCTCAGGGCACATGCTCATAGAGATGGCATGCAATGATCACGGACTTTTCTTGGAGATTGCTCAGGTGATCCGAAGACTGGACATTACCATCTTGAGAGGGATTTTAGAAAACCGTTCGAGCACAAGCTGGGCTTGTTTCATCGTCGAGTTAAAATAG 1935 0.4124 MEASSITELLKDFCDTMPWQYAVFWKLNHLSPMTLNWESGYQKSNEPLGSMWGDINFESVEDVYSSRTEGTDDVGDYSVRLLMIEMSHRKYSLGEGVVGKSALAKEHCWVSSEDIFTGKFDTSLLPECPDEWLLQFASGIKTIVLVPVLPQGVLQFGSFKGVAEDREFVANIKEKFHFIHSMEANTTALNYGIDSQDWSFSDLSNYLMDSIDESSAASTSLNMNESARFSQDEYLFSRETQLKSLKRANENQMFSSSFEASTDLTHISYVETKPNHLVEEIWPWSQFVGNEEKFGETSYGLSSYSDNNLTGHVNVKNFNDFSSVPSVSAFHKAVGSVAYRNILDEDTFSSSTLISNKKEHDHITSFELHEGLEPEYLLDAVVGDLYSASDDTSCRSNSFRSHITMPSEFTGSIQPKITSVERTAFVKNSDVGSGLMPAVTTNAKDIFASSFDGNSSLLVDEAPREPVNNHVVPISRPKLSSVSKKRAKVGNKKNSRPRDRQLIMDRMKELRELIPDGGRCSIDNLLERTVKHMMYLRMVTSHAEKLKRFVDREDLQVPERKRKKTNGSYPGRSCAFDLESEQSWPIVIEDLESSGHMLIEMACNDHGLFLEIAQVIRRLDITILRGILENRSSTSWACFIVELK* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3112 644 MobiDBLite consensus disorder prediction 478 498 - -
Psa3g3112 644 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 176 IPR025610 -
Psa3g3112 644 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 487 536 IPR011598 GO:0046983
Psa3g3112 644 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 1 642 - -
Psa3g3112 644 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 642 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3112 Psa-Chr3 263133929 263137223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3112 483 643 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 50.000 5.22e-43 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3112 - - aprc:113862780 791.956