Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3090 ATGGCTACAAATCAAGAAGAGGTGACACTTATAGGAGTTGTTGGAAGCCCATTTGTATGTAGAGTACAAATTGCTCTGAAATTGAAGGGAATTGAATACAAATTTGTTGAAGAAGATTTGGCCAACAAAAGTGATCTTCTCCTCAAATCCAATCCAGTTCATAAGAAGGTTCCAGTCTTTGTTCACAATGATAAGCCCATTTCAGAATCTCTTGTGATTCTTGAATATATTGAAGAAACTTGGAATCAAAACCCCATTTTGCCCTCTAGTCCTTACCAAAAAGCCGTGGCTCGATTTTGGTCCAAGGTCATCGACGATAAGATTGTGGCGCCTTTTTTTAGAGCTGTTTATGCTGTTAACGATGATGAGAAAGTGCGTGAGAAGAATATCGAAGAATCATCTCAGGCTCTTGAGTTTCTTGAGAGTGAGTTGAAGGACAAGTTCTTTGGAGGAGAAGAGATTGGTTTTGTGGATATTGCTGCTGTTGTCATAGCTTTTTGGGTTCCTTTGGTTCAAGATATATCAGGGTTGCAATTGTTTACTGCTCAAAAGTTTCCAAAGCTTTACAATTGGAGCAAAGAGTTTCTCAACCATCCAATTGTGAAGGAACTTGTGCCTCCAAGAGAACCTCTTTTTGTCTATTTCAAAGCTAAATATGATAGCCTTGTTTCTTCTTCAAAATAG 684 0.383 MATNQEEVTLIGVVGSPFVCRVQIALKLKGIEYKFVEEDLANKSDLLLKSNPVHKKVPVFVHNDKPISESLVILEYIEETWNQNPILPSSPYQKAVARFWSKVIDDKIVAPFFRAVYAVNDDEKVREKNIEESSQALEFLESELKDKFFGGEEIGFVDIAAVVIAFWVPLVQDISGLQLFTAQKFPKLYNWSKEFLNHPIVKELVPPREPLFVYFKAKYDSLVSSSK* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3090 227 CDD GST_N_Tau 8 81 - -
Psa3g3090 227 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Psa3g3090 227 Gene3D Glutaredoxin 1 89 - -
Psa3g3090 227 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 222 - -
Psa3g3090 227 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Psa3g3090 227 Pfam Glutathione S-transferase, C-terminal domain 112 199 IPR004046 -
Psa3g3090 227 SFLD Main.3: Omega- and Tau-like 4 225 IPR045073 -
Psa3g3090 227 Gene3D - 90 226 - -
Psa3g3090 227 SFLD Main (cytGST) 4 225 - -
Psa3g3090 227 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Psa3g3090 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 220 IPR010987 -
Psa3g3090 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 222 IPR045073 -
Psa3g3090 227 SUPERFAMILY GST C-terminal domain-like 79 220 IPR036282 -
Psa3g3090 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3090 Psa-Chr3 261501455 261502471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3090 4 225 Glutathione S-transferase Gene Family AT3G09270 50.000 2.13e-75 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3090 K00799 - gmx:100806714 352.443