Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3089 ATGGCGACAAATCAAGAAGAGGTGAAACTTTTTGGAGTTGTGGGAAGTGCATTTGTACATGGTGTTCAAATTGCTCTAAAACTGAAGGGTATTGAATACGAATTTGTGGAAGAAGATTTGGCCAACAAAAGCGATCTTCTTCTCAAATTCAACCCAGTTTACAAGAAGGTTCCAGTTTTTGTTCACAATGAAAAGCCTATATCAGAATCTAATGTGATTCTTGAATACATTGATGAAACTTGGAAGCAAAATCCCATTTTACCCTCTGATCCTTACCAAAAAGCCTTGGTTCGGTTTTGGTCCAAGTTCATCCAGGACAAGATTGTGGCATCTTTTTCTAAAGCTGTTCGTGCTTTTAACGACGAGAAAGAGCGTGAGAAGAACATTGCAGAAGCATCTGAGGCTCTTAAGATTCTTGAGAATGAGTTGAAGGAGAAATTCTTTGGGGGAGAAGAGATTGGTTGTGTGGATATTGCTGCTGTGTTCGTAGCATTCACGATCCCTTTGATTCAAGAGGTAGCAGGGTTTGAATTCTTCACTGCTGGAAAGTTTCCAAAGCTTTACAAGTGGAGCAAAGAATTTCTGAACCATTCAATTGTGAAGGAAATTGTGCCTGCAAGAGAGCCTACTTTGGTCTATTTCAAAGCTAGATATGAGCTCCTTGTTTCTGCCTCAAAATAG 681 0.3965 MATNQEEVKLFGVVGSAFVHGVQIALKLKGIEYEFVEEDLANKSDLLLKFNPVYKKVPVFVHNEKPISESNVILEYIDETWKQNPILPSDPYQKALVRFWSKFIQDKIVASFSKAVRAFNDEKEREKNIAEASEALKILENELKEKFFGGEEIGCVDIAAVFVAFTIPLIQEVAGFEFFTAGKFPKLYKWSKEFLNHSIVKEIVPAREPTLVYFKARYELLVSASK* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3089 226 CDD GST_N_Tau 8 81 - -
Psa3g3089 226 Gene3D - 90 225 - -
Psa3g3089 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Psa3g3089 226 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Psa3g3089 226 Pfam Glutathione S-transferase, C-terminal domain 109 196 IPR004046 -
Psa3g3089 226 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Psa3g3089 226 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 221 - -
Psa3g3089 226 Coils Coil 122 142 - -
Psa3g3089 226 Gene3D Glutaredoxin 1 89 - -
Psa3g3089 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Psa3g3089 226 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Psa3g3089 226 SUPERFAMILY GST C-terminal domain-like 79 220 IPR036282 -
Psa3g3089 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 221 IPR045073 -
Psa3g3089 226 SFLD Glutathione Transferase (cytosolic) 4 221 IPR040079 -
Psa3g3089 226 SFLD Main.3: Omega- and Tau-like 4 221 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3089 Psa-Chr3 261493287 261494273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3089 4 223 Glutathione S-transferase Gene Family AT3G09270 48.661 5.58e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3089 K00799 - gmx:100527851 321.242