Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3087 ATGGTAATCATCATAGTTTTGCCCATATCTGAATTAAATGAAAACTGGATATCTCAATTAGCGCTACGACAACTTAGAGAAGAAATTATGACGATGATGAAGGAAATAGAGAAAACAAATATGGTAATCATCATACTTTTGCCCGTATCTGAATTATCTGAAAAATGGATATCTGAATTAGCGCTACAACTTAGCGAAGACATTATGATGACGGGGGTTATTTATATTCAAGCTAGTTTCAACAATACCATTGTGACTGTTACAGATGTACGAGGTCGGGTGATTTCTTGGTCCTCCACCAGTTCATGTGGATTCAAGGGTACACGAAGGGGGACGCCATTTGCCACTCAAACCATAGCGGGAAATGTTATTCAAACAGTAGTCGAGCAATGCATGCAACGAGCAGAAGTCAAGATAACGGGTTCGGGTCTAAGAAGAGATGTGGCATTAAGAGTTATTTATAGAAGTGGGATACTATTAAAGGTTCTACGGGATGTAACCCCTCTGCCACATAATGGATATAGGGCTCCTAAAAAAAGACGTGTGTAA 549 0.3934 MVIIIVLPISELNENWISQLALRQLREEIMTMMKEIEKTNMVIIILLPVSELSEKWISELALQLSEDIMMTGVIYIQASFNNTIVTVTDVRGRVISWSSTSSCGFKGTRRGTPFATQTIAGNVIQTVVEQCMQRAEVKITGSGLRRDVALRVIYRSGILLKVLRDVTPLPHNGYRAPKKRRV* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3087 182 Gene3D Ribosomal protein S11 63 182 IPR036967 GO:0003735|GO:0005840|GO:0006412
Psa3g3087 182 Pfam Ribosomal protein S11 72 181 IPR001971 GO:0003735|GO:0005840|GO:0006412
Psa3g3087 182 PANTHER 30S RIBOSOMAL PROTEIN S11, CHLOROPLASTIC 70 181 - -
Psa3g3087 182 SUPERFAMILY Translational machinery components 69 182 - -
Psa3g3087 182 Coils Coil 22 42 - -
Psa3g3087 182 Hamap 30S ribosomal protein S11 [rpsK]. 23 182 IPR001971 GO:0003735|GO:0005840|GO:0006412
Psa3g3087 182 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 70 181 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3087 Psa-Chr3 261343426 261345496 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3087 60 170 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 31.667 9.57e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3087 K02948 - jre:26380815 177.563