Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3086 ATGATTCAGCCTCAAACCTATTTAAATGTAGCCGATAATAGTGGAGCGCGTGAATTGATGTGTATTCGAATCATAGGAGCTAGTAATCTACGGTATGCTTATATTGGTGACATTGTTGTTGCTGTAATAAAAAAAGCAGTGCCAAATTCATCTTTAGAAAGATCTCAAGTCATCAGAGTTGTAATTATACGTACTTGTAAAGAACTAAAACGTCGTAATTGTATAATAATAAAGTATGATGATAATGTAGTGATTCTCATTGATAAAGAAGGAAATCCAAAAGGAATTTGA 291 0.323 MIQPQTYLNVADNSGARELMCIRIIGASNLRYAYIGDIVVAVIKKAVPNSSLERSQVIRVVIIRTCKELKRRNCIIIKYDDNVVILIDKEGNPKGI* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3086 96 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 95 IPR000218 GO:0003735|GO:0005840|GO:0006412
Psa3g3086 96 SMART Ribosomal_L14_2 1 96 IPR000218 GO:0003735|GO:0005840|GO:0006412
Psa3g3086 96 Gene3D Ribosomal protein L14 1 96 IPR036853 GO:0003735|GO:0005840|GO:0006412
Psa3g3086 96 TIGRFAM rplN_bact: ribosomal protein uL14 1 95 IPR005745 GO:0003735|GO:0006412|GO:0015934
Psa3g3086 96 Pfam Ribosomal protein L14p/L23e 1 95 IPR000218 GO:0003735|GO:0005840|GO:0006412
Psa3g3086 96 Hamap 50S ribosomal protein L14 [rplN]. 1 96 IPR000218 GO:0003735|GO:0005840|GO:0006412
Psa3g3086 96 PANTHER 50S RIBOSOMAL PROTEIN L14, CHLOROPLASTIC 1 95 - -
Psa3g3086 96 SUPERFAMILY Ribosomal protein L14 1 95 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3086 Psa-Chr3 261342638 261342928 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3086 8 95 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 32.609 3.21e-11 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3086 K02874 - gmx:3989333 161.384