Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3084 ATGGCTACAAATCAGGAAGATGTGAAACTCTTGGGAGCTCTTGCAAGCCCATTTGTGTGCAGAGTACAACTTGCTCTAAATCTGAAGGGAATTCAATATGAATTTCTTCCAGAAAAATTGCCTAACAAAAGTGAACTTCTTCTCAAATATAACCCAGTTTATAAAAAGGTTCCGGTTTTTGTTCACAATGAAAAACCCATATCAGAATCCCTTGTTATTCTTGAATACATTGATGAAACATGGAAACAAAGTCCAATCCTGCCTTCTGATCCTTACAAAAGAGCCTTGGCTCGTTTCTGGACCAAGTTCATAGATGACAAGATTGTGGTTCCTTCATTCAAATCTGTTTTCACAATTGATGAGAAAGAGCGTGACAAGAATATGGAAGAATCATCTGAGGCTCTTAAGGTTCTTGAGAATGAGTTGAAGGACAAGTTCTTCGGAGGTGAAGAGATTGGTTTTGTGGATATTGCTGCTGTTGCCATAGCTTTTTGGATTCCTTTGATTCAAGAGATATCAGGGTTGCAATTGTTTACTGCTGAAAAGTTTCCAAAGCTTTACAAATGGAATCAAGAATTTCTCAACCATCAAATTGTGAAGAAAAGTTTGCCTCCTAGAGAACCACTTTTCGCCTTATTCAAAGGTCGCTATGAGAGCCTTTTTAATGCTTCAAAATAA 678 0.3746 MATNQEDVKLLGALASPFVCRVQLALNLKGIQYEFLPEKLPNKSELLLKYNPVYKKVPVFVHNEKPISESLVILEYIDETWKQSPILPSDPYKRALARFWTKFIDDKIVVPSFKSVFTIDEKERDKNMEESSEALKVLENELKDKFFGGEEIGFVDIAAVAIAFWIPLIQEISGLQLFTAEKFPKLYKWNQEFLNHQIVKKSLPPREPLFALFKGRYESLFNASK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3084 225 CDD GST_N_Tau 8 81 - -
Psa3g3084 225 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Psa3g3084 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Psa3g3084 225 Gene3D Glutaredoxin 1 89 - -
Psa3g3084 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Psa3g3084 225 SFLD Glutathione Transferase (cytosolic) 4 221 IPR040079 -
Psa3g3084 225 SFLD Main.3: Omega- and Tau-like 4 221 IPR045073 -
Psa3g3084 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Psa3g3084 225 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Psa3g3084 225 Gene3D - 90 224 - -
Psa3g3084 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Psa3g3084 225 Pfam Glutathione S-transferase, C-terminal domain 112 195 IPR004046 -
Psa3g3084 225 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Psa3g3084 225 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 220 - -
Psa3g3084 225 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3084 Psa-Chr3 261313765 261315250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3084 3 220 Glutathione S-transferase Gene Family AT2G29420 50.685 9.64e-78 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3084 K00799 - gmx:100806714 349.747