Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3078 ATGGCATCAAATAAGGAAGATGTGAAGCTTTTAGGAATGGTGGAAAGTCCATTTGTGAGTAGGGTCGATATTGCTCTAAAATTGAAGGGAGTTGAATACAAATATGAAGTAGAAAACTTGCAAAACAAGAGTGAGTTTCTCCTCAAATATAATCCAGTTTATAAAAAAGTTCCTGTATTAGTTCATAATGGAAAACCAATCTCAGAATCACTTGTCATTCTTGAGTACATCGATGAAACATGGAAGCAAAATCCAATCTTGCCTTCTGATCCTTACAAAAGAGCCTTGGCTCGTTTCTGGTCAAAATTCATTGATGACAAGATTATTAATGCTGCACGGAAAGCTCTATACACTCATGATGAGAAAGAACGTGAGAAAGGTGTTGAGGAAATAGAAGAGGCTCTTCATCTTTTTGAGAATGAGCTCAAGGGTAAATTCTTTGGTGGAGATGAGATTGGAATTGTTGACATTACTGCTGTTCTTATAGCTTACTGGCTCCCTATTATACAAGAAGCATTTGGAGCGAAGTTGTTTACTAGTGACAAATTTCCCAAGCTTTACAATTGGAGCCAAGACTTCAACAATCACCCAATTGTTAAGGAAACATTGCCTCCTAGGGAAACCCTTATGGCCTATTACAAAGGTCACTATGAAAGGCATGTTGCTTCAAACAAATAG 678 0.3732 MASNKEDVKLLGMVESPFVSRVDIALKLKGVEYKYEVENLQNKSEFLLKYNPVYKKVPVLVHNGKPISESLVILEYIDETWKQNPILPSDPYKRALARFWSKFIDDKIINAARKALYTHDEKEREKGVEEIEEALHLFENELKGKFFGGDEIGIVDITAVLIAYWLPIIQEAFGAKLFTSDKFPKLYNWSQDFNNHPIVKETLPPRETLMAYYKGHYERHVASNK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3078 225 CDD GST_N_Tau 8 81 - -
Psa3g3078 225 Gene3D - 90 224 - -
Psa3g3078 225 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Psa3g3078 225 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Psa3g3078 225 Gene3D Glutaredoxin 1 89 - -
Psa3g3078 225 SFLD Main (cytGST) 4 222 - -
Psa3g3078 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Psa3g3078 225 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 220 - -
Psa3g3078 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Psa3g3078 225 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Psa3g3078 225 SFLD Main.3: Omega- and Tau-like 4 222 IPR045073 -
Psa3g3078 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Psa3g3078 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Psa3g3078 225 Pfam Glutathione S-transferase, C-terminal domain 115 197 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3078 Psa-Chr3 261139329 261140328 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3078 3 224 Glutathione S-transferase Gene Family AT3G09270 52.889 8.94e-76 226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3078 3 261139329 261140328 Psa3g3078 3 261139329 261140328 ECH