Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3076 ATGGCATCAAATCAGGAAGAAGTGAAACTTTTTGGAATGAGAGGAAGTCCATTTGTAACGAGGGTAGATATAGCTCTAAAATTAAAGGGAATTGAATACGAATATGTGGAAGAAAAATTAGGAAACTTTAGTGAAACACTCATCAAATATAATCCCGTTTATAAAAAAGTTCCTGTGTTAGTTCATAATGGAAAACCAATCTCAGAATCACTTGTGATTCTTGAGTACATCGATGAGACATGGAAGCAAAATCCAATCTTGCCTTCTGATCCTTACAAAAGAGCCTTGGCTCGTTTCTGGTCAAATTTCATAGATGATAAGTATTTGGGTGCTGTACGGAAAGCTAGTTCTTCTCTTGATGAAAAGGAACGTGAGGAGAGTTTTAAGGAAATAGAAGTGGCTTTTCAATTTCTTGAGAATGAACTCAAGGAGAAATATTTTGGTGGAGAAGAGATTGGGATTGTTGATATTACAGGTGTGTTTATAGCTTTTTGGTTTCCTGTTATACAAGAAGCTACAGGATTGAAGTTGTTTACTAGTGACAAATTTCCTAAGCTTTATAAATGGAGTGAAGACTTTAACAATCACCCAATTGTTAAGGAACAATTGCCTCAGAGGGAAACACTTTTGGCTTTTTTTAAAGCTCGTTTTGAAAGTCTTGTTGCTTCAAAATAG 675 0.3511 MASNQEEVKLFGMRGSPFVTRVDIALKLKGIEYEYVEEKLGNFSETLIKYNPVYKKVPVLVHNGKPISESLVILEYIDETWKQNPILPSDPYKRALARFWSNFIDDKYLGAVRKASSSLDEKEREESFKEIEVAFQFLENELKEKYFGGEEIGIVDITGVFIAFWFPVIQEATGLKLFTSDKFPKLYKWSEDFNNHPIVKEQLPQRETLLAFFKARFESLVASK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3076 224 CDD GST_N_Tau 8 81 - -
Psa3g3076 224 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Psa3g3076 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Psa3g3076 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Psa3g3076 224 Pfam Glutathione S-transferase, C-terminal domain 112 197 IPR004046 -
Psa3g3076 224 Gene3D Glutaredoxin 1 89 - -
Psa3g3076 224 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 219 - -
Psa3g3076 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 219 IPR045073 -
Psa3g3076 224 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Psa3g3076 224 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Psa3g3076 224 Gene3D - 90 224 - -
Psa3g3076 224 SFLD Glutathione Transferase (cytosolic) 4 222 IPR040079 -
Psa3g3076 224 SFLD Main.3: Omega- and Tau-like 4 222 IPR045073 -
Psa3g3076 224 SUPERFAMILY Thioredoxin-like 8 107 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3076 Psa-Chr3 261105800 261107080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3076 4 223 Glutathione S-transferase Gene Family AT3G09270 53.571 2.13e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3076 K00799 - gmx:100527851 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3076 3 261105800 261107080 Psa3g3076 3 261105800 261107080 ECH