Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3040 ATGCGAGAACAGGTGATATTTGGAAGGCCTTTGCTGACCTCTGAACAAGATGTTTATTCAAAAGTGCTTAAAGACACTGACAACTTCATTATATTTGGATCCAGTGGATTTTGGAAATTAATCACAAACGATTATGCTGCTGAAATTGTTAACAGCAGTCCTCGGGATGATATCGCGAAAATACTAGCAGTAATTGCTATAGAGAAGGGGGCTAGGAAAAAGAAAACTAAAAACGATTATGCTGCTGAAATTGTTAACAGCAGTCCTCGGGATGATATCGCGAAAATACTAGCAGTAATTGCTATAGAGAAGGGGGCTAGGAAAAAGAAAACTAAGTATAGCAACATTGTTGAGATTTCTAAGGGAGAACACGTTGATGGCTGTTGGGGTGTGCAACCACAGAGATCTAGGCATGTCTATCACAATGATATCACTGTGATAGTTGTCTTTTTCGACAATAAGCCAAGCAGTGTGAAGCCTGAGATCAGTTGTTATACATGCAGTGATTTTCCCGATACACCTTTGGAGTTTAAGCATTTCTATAATAATAATAATAATAATATGAATGTATGA 573 0.377 MREQVIFGRPLLTSEQDVYSKVLKDTDNFIIFGSSGFWKLITNDYAAEIVNSSPRDDIAKILAVIAIEKGARKKKTKNDYAAEIVNSSPRDDIAKILAVIAIEKGARKKKTKYSNIVEISKGEHVDGCWGVQPQRSRHVYHNDITVIVVFFDNKPSSVKPEISCYTCSDFPDTPLEFKHFYNNNNNNMNV* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3040 190 SUPERFAMILY PP2C-like 7 153 IPR036457 -
Psa3g3040 190 Pfam Protein phosphatase 2C 11 72 IPR001932 -
Psa3g3040 190 PANTHER ALPHABET, ISOFORM E-RELATED 77 154 - -
Psa3g3040 190 PANTHER ALPHABET, ISOFORM E-RELATED 8 81 - -
Psa3g3040 190 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 77 154 - -
Psa3g3040 190 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 8 81 - -
Psa3g3040 190 Gene3D - 2 158 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3040 Psa-Chr3 258771999 258772571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3040 9 163 PP2C-type Phosphatase Gene Family AT5G06750 32.075 1.59e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3040 K01102 - zju:107432329 78.5666