Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2987 ATGGGTTCCACTCGCTCAGATGATGGCTCTGCCACACACAAAGAACGCTTACGCTGGACACAACAACTCCATGATCTCTTTGTGGAGGCTGTAAATAGGCTTGGTGGCCCTGATAGGGCAACACCAAAGGGTATATTAAAGGTAATGACGGCTATGGACATCTCAAATTTGAACATTTATCATGTCAAAAGCCACTTGCAGAAATACAGGATCTCCAAGTTGATTCCAGAATCCACCACAAGAGGAAAGATTGAGAAGAGAGGTGTATCACATATACTTCCAAATTTCTGTTCTATATCTGCTCTTCAACTAAAGGAAGTCCTTCAAATGCAAGCAGAGGTGCACAAACGAATGAATGCCAGAGTTGAGGTTCAGAAAAGCTTGAAGCTGAAAATTGAAGCACAAGGAAAGTACCTAGATAGAATTGGACAGAGTAGTCAGATCAAAACAATTACAAGAAAAGCATGCAAGTCTTTTGTGGGTAGAGCTATACCTCTACCCTCTCTTTCTGAGGAATCTGAATCCTTAAAAACACAATCCGAGGAAGAACATCAAACAGCCAAAAAGAAAACGATAACCGATGATGATGATGACAGTGTTTCTCCTGCAGATTTTGAACTAGGATCATCATCCACAATCTCAGAATTCTGCAACCAAACTTGGAATCTTTCTTGGAGCCAGCTGGCTGAAGCAACATGCCAATCACCTTTGGTGTCCAGTTTCTTATTATAG 732 0.4139 MGSTRSDDGSATHKERLRWTQQLHDLFVEAVNRLGGPDRATPKGILKVMTAMDISNLNIYHVKSHLQKYRISKLIPESTTRGKIEKRGVSHILPNFCSISALQLKEVLQMQAEVHKRMNARVEVQKSLKLKIEAQGKYLDRIGQSSQIKTITRKACKSFVGRAIPLPSLSEESESLKTQSEEEHQTAKKKTITDDDDDSVSPADFELGSSSTISEFCNQTWNLSWSQLAEATCQSPLVSSFLL* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2987 243 Gene3D - 13 74 - -
Psa3g2987 243 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 200 - -
Psa3g2987 243 SUPERFAMILY Homeodomain-like 13 71 IPR009057 -
Psa3g2987 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 74 IPR017930 -
Psa3g2987 243 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 72 IPR006447 GO:0003677
Psa3g2987 243 Pfam Myb-like DNA-binding domain 17 70 IPR001005 -
Psa3g2987 243 Pfam MYB-CC type transfactor, LHEQLE motif 103 142 IPR025756 -
Psa3g2987 243 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 200 IPR044848 GO:0003700
Psa3g2987 243 MobiDBLite consensus disorder prediction 170 200 - -
Psa3g2987 243 MobiDBLite consensus disorder prediction 175 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2987 Psa-Chr3 250710581 250713036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2987 1 139 G2-like Transcription Factor Family AT4G28610 46.207 3.46e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa3g2987 Myb_DNA-binding 9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2987 - - pvu:PHAVU_008G103100g 273.478