Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2973 ATGGCACCTACTACACAAGCTGCAAATGGAAACCACTCAACTGAAACCAAAGGAAAGACCATTACTTGCAAAGCCGCTGTGGCATATGGTCCCGGAGAACCCTTTGTAGTCGAAGAAATTCTTGTCCATCCTCCTCAGAAAATGGAAGTTCGAATCAAAATCCTCTATACTTCCATTTGCCACACCGATCTCAGCGGCTGGCAAGGCGAGTGCGAACCTCAACGTGCTTTCCCTCGAATTTTCGGCCATGAAGCTTCCGGGATTGTGGAGAGTGTAGGGGAAGGAGTAAGTGACATGAAAGAAAGGGACAATGTGGTGGTAATATTCAACGGAGAATGTGGCGAGTGTGCGTGCTGCACGTGTGAGAAAACCAACATGTGTGAGAAATTTGGAGTAAATCCAATGAAGAAGGAAATGTGTGATGGAACGAGTAGGTTTAGTACCAAAAATGGGAATAAGCCTATTTTCCATTTTATGAACACTTCAACTTTCACGGAGTATACTGTGGTGGATTCAGCTTGTGTTGTTAAGATCAATCCTGAATATGCACTTAGTCTCAAGAATCTCACCTTGCTTAGTTGTGGAGTTTCAACAGGAATTGGAGCTGCTTGGAATACTGCTAATGTTCATGCTGGTTCATCTGTAGCCGTCTTTGGTTTAGGTGCAGTTGGGCTAGCTGTTGCAGAAGGGGCACGCGCCAGAGGTGCTTCCAAAATAATAGGTGTGGATATCAATCCAGACAAATTCATCACAGCTCAAGCTATGGGAATCACAGACTTCGTAAATCCAACTGATAAAGAGAAGCCGGTTTATGAGAGAATCAGAGAAATGACGGGAGGAGGTGCAGACTACAGTTTTGAATGTACAGGAAACTTGAATGTTCTGAGAGATGCCTTCTTGTCTGTTCATGAGGGTTGGGGATTGACTGTACTGTTGGGAATTCATGCATCACCAAAGTTGCTTCCCATCCATCCAATGGAGCTCTTTGACGGTCGCAGAATTGAAGGATCGGTGTTTGGAGGTTTCAAAGGCAAAAGTCAGTTGCCTAATCTTGCCACAGAATGCATGCAAGGAGTGATAAAGCTGGATAATTTCATCACTCATGAGCTTCCATTTGAGGAGATAAACAAAGCCTTTGATCTTTTGATTGCCGGGAAGTCGCTGAGATGCCTTCTGCACCTCTAA 1185 0.4456 MAPTTQAANGNHSTETKGKTITCKAAVAYGPGEPFVVEEILVHPPQKMEVRIKILYTSICHTDLSGWQGECEPQRAFPRIFGHEASGIVESVGEGVSDMKERDNVVVIFNGECGECACCTCEKTNMCEKFGVNPMKKEMCDGTSRFSTKNGNKPIFHFMNTSTFTEYTVVDSACVVKINPEYALSLKNLTLLSCGVSTGIGAAWNTANVHAGSSVAVFGLGAVGLAVAEGARARGASKIIGVDINPDKFITAQAMGITDFVNPTDKEKPVYERIREMTGGGADYSFECTGNLNVLRDAFLSVHEGWGLTVLLGIHASPKLLPIHPMELFDGRRIEGSVFGGFKGKSQLPNLATECMQGVIKLDNFITHELPFEEINKAFDLLIAGKSLRCLLHL* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2973 394 PANTHER ALCOHOL DEHYDROGENASE 16 393 - -
Psa3g2973 394 Pfam Alcohol dehydrogenase GroES-like domain 49 177 IPR013154 -
Psa3g2973 394 Gene3D - 27 390 - -
Psa3g2973 394 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 82 96 IPR002328 GO:0008270|GO:0016491
Psa3g2973 394 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 184 358 IPR036291 -
Psa3g2973 394 Pfam Zinc-binding dehydrogenase 222 341 IPR013149 -
Psa3g2973 394 Gene3D - 199 337 - -
Psa3g2973 394 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 16 393 - -
Psa3g2973 394 SUPERFAMILY GroES-like 344 393 IPR011032 -
Psa3g2973 394 SUPERFAMILY GroES-like 16 218 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2973 Psa-Chr3 250142184 250152047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2973 49 383 Monolignol Biosynthesis Gene Families AT2G21890 26.706 8.39e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2973 K00001 - gmx:100815166 596.66