Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2969 ATGGCTTCTCGCCAAATACAACAAGAGCAACAACCATGGCTTTTGGAGAATGGTCATCCAAAGGTCTTAACCAAGGAGTCTAGACATGGACATGGCCGGAGCCGAACCGCGCATAACATGTCGTCCTCTTCGTTGCGAAAGAAGTCCGACCGGACACTCGTGTCGAAGATTCGATGCGCTTCGGTTAGGAATGTGGTCGCTAACCTCCAAGAGGTTATTCTTGGGACCAAGCTTTCCATTCTCTTTCCTGCCATTCCTGCTGCTATCGTAGCTCATTATCTTGGCTTAGGAAGATCCTGGGTTTTCATATTGAGCTTACTTGGCCTCACTCCACTCGCTGAACGTGTGAGCTTTCTCACAGAACAAATTGCCATTTTCACTGGTCCAACAGTTGGAGGACTTCTTAATGCAACATGTGGGAATGTTACTGAGCTTATTATTGCAATATTTGCTCTTACCACCAACAAAATTGCTGTTGTGAAGTATTCTCTCTTAGGTTCCGTGCTTTCGAATCTTCTTCTTGTTCTCGGAACTTCTCTACTTTGCGGTGGAATTGCGAATATTGGAGAGGAGCAGAAGTACGACAGAAGACAAGCGGATGTGAACTCGTTGATGTTGTTATTGGCGTTGTTATGCCATTTGCTTCCGTTGCTATTCACGTACAGCGCTGCTTCGGCTGAACTCACCGTAGAGCCTTCGCTGTATTTGTCGAGAGCTTCTAGCATTGTTATGCTGGTTGCTGGATTTGCTTGGTTGGCTGGAATGACTGTGTTCATTGCTTTGTTGTCTGAATATGTGCGTGGATACAATGAGGATGCATCAGATTCATGGGGTTTATCTGTGAGCTTTCTCAGCATAATCTTGCTTCCGATAGTTGGCAATGCGGCTGAACATGCGGGTGCAATCATTTTCGCTTTCAAGAACAAGCTGGACATTTCCTTAGGTGTTGCATTGGGCTCTTCCACTCAAATTGCCATGTTTGTGGTTCCACTCTGTGTTACTGTTTCTTGGGGAATGGGTGTGAATATGGATCTAAACTTCAACCTCCTTGAGACAGGTTCTCTTGCTGATGGTACTTCTCACTACATGAAAGGCCTTGTTCTCTTATTTTGCTACTTTGTTATTGCTGCTTGCTTCTTTGTACAAAGAATTCCCAATGACCCAAATGATGTTCATAACATCACTCTTAAAACTGTCACTGATTCAGTTTTAAGTGCCTAA 1221 0.4447 MASRQIQQEQQPWLLENGHPKVLTKESRHGHGRSRTAHNMSSSSLRKKSDRTLVSKIRCASVRNVVANLQEVILGTKLSILFPAIPAAIVAHYLGLGRSWVFILSLLGLTPLAERVSFLTEQIAIFTGPTVGGLLNATCGNVTELIIAIFALTTNKIAVVKYSLLGSVLSNLLLVLGTSLLCGGIANIGEEQKYDRRQADVNSLMLLLALLCHLLPLLFTYSAASAELTVEPSLYLSRASSIVMLVAGFAWLAGMTVFIALLSEYVRGYNEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSSTQIAMFVVPLCVTVSWGMGVNMDLNFNLLETGSLADGTSHYMKGLVLLFCYFVIAACFFVQRIPNDPNDVHNITLKTVTDSVLSA* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2969 406 Gene3D - 129 381 IPR044880 -
Psa3g2969 406 MobiDBLite consensus disorder prediction 17 49 - -
Psa3g2969 406 Pfam Sodium/calcium exchanger protein 100 246 IPR004837 GO:0016021|GO:0055085
Psa3g2969 406 Pfam Sodium/calcium exchanger protein 249 378 IPR004837 GO:0016021|GO:0055085
Psa3g2969 406 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 8 249 IPR004713 GO:0006812|GO:0008324|GO:0016021
Psa3g2969 406 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 247 391 IPR004713 GO:0006812|GO:0008324|GO:0016021
Psa3g2969 406 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 247 391 - -
Psa3g2969 406 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 8 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2969 Psa-Chr3 249922931 249926099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2969 11 386 Antiporters AT2G38170 61.021 8.82e-169 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2969 K07300 - gmx:100779440 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2969 3 249922931 249926099 Psa3g2969 3 249922931 249926099 ECH