Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2967 ATGGCTGCGTTTACGAAGGCGAGGGTTGCAGCTGCTAAGATTTTCCGGATAATTGATCACAAGCTTGGAATTGACAGAAACAGTGAGTCAGGATTAGAATTGGAGACAGTTACTAGACTTGTGGAACTGAAAAATGTCGACTTTTCTTATCCCTCTAGGCCCGAGATAGGACTTGTGTGTCAAGAGCCTGCTTTGTTCGCTACCACGATTAGAGAAAATATACTCTTGGGAAGACCTGATGCAAAACAGGTTGAGATTGAAGAAGCTGCTAGGGTTGCTAATGCTCATTCATTCATCGTAAAACTTCCCGAAGGCTATGAAACCCAGAATCCAATGATTCTTCTTCTTGATGAAGAAACAAGTGCGTTGGACTCTGAATCAGAAAAGCTGGTGCAAGAAGCATTTGACCGAACAACTCTTGTAATTGCGCATCGTCTCTCCATAATTCGCAAAGCTGACCTTGTAGCTGTGATTCAACAAGGAAGTGTTTTTGAAATTGGAACTCATGACGAGCTCTTCTCCAAAGGGGAAAATAGAGTTTATGCCAAGCTTATCAGAATGAAGGAGACGGCAAATGAAAGTTCAACAAGCAATGCCAGAAAAAGTAGTGCAAGGCCTTCAAGTGCTAGGAATTCTGGTTTGTATTGCAGTGGCGGCTTGCCCTTGTTCTCGTTGCTGTTTTCTCGATTGTTGTCGCAGCCAATGTCTTATAGAAAATGTTCATGTCGGTTTTCTCTGGTAACTTGGAAGCTGCTCATACTAAGGCCACACAACTAG 777 0.4299 MAAFTKARVAAAKIFRIIDHKLGIDRNSESGLELETVTRLVELKNVDFSYPSRPEIGLVCQEPALFATTIRENILLGRPDAKQVEIEEAARVANAHSFIVKLPEGYETQNPMILLLDEETSALDSESEKLVQEAFDRTTLVIAHRLSIIRKADLVAVIQQGSVFEIGTHDELFSKGENRVYAKLIRMKETANESSTSNARKSSARPSSARNSGLYCSGGLPLFSLLFSRLLSQPMSYRKCSCRFSLVTWKLLILRPHN* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2967 258 Gene3D - 31 54 IPR027417 -
Psa3g2967 258 Gene3D - 55 109 IPR027417 -
Psa3g2967 258 Gene3D - 110 189 IPR027417 -
Psa3g2967 258 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 56 IPR039421 -
Psa3g2967 258 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 53 218 IPR039421 -
Psa3g2967 258 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 53 218 - -
Psa3g2967 258 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 1 56 - -
Psa3g2967 258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 186 IPR027417 -
Psa3g2967 258 Gene3D ABC transporter type 1, transmembrane domain 190 232 IPR036640 GO:0005524|GO:0016021
Psa3g2967 258 Gene3D ABC transporter type 1, transmembrane domain 2 30 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2967 Psa-Chr3 249871367 249872481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2967 53 212 Calmodulin-binding Proteins AT2G36910 71.429 4.27e-79 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2967 K05658 - dcr:108227230 240.35