Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2963 ATGGATGGTCATCATCTCCATCATCATCAACATCAACATCATCAACAACAACAACATCATCAACAACAAAGACAACAACAACAGCAACATCAACAACAACAACAACATCAGCAACATGTTCAAAACATCATAGGAACTAGCAGTCTTAACATGGATGTCACCGATAGGTTCCCTCAATGGAGCATCCAAGAAACAAAGGAGTTTCTCATGATCCGTTCAGAGCTTGATCAAACTTTCATGGAGACAAAGAGAAACAAACAGCTTTGGGAAGTTATCTCTAACAACATGAAGGAAAAGGGTTATCATAGAAGCGCTGAACAGTGCAAGTGCAAATGGAAAAACCTTGTTACTCGCTATAAGGGGTGTGAAACAATGGAGATAGAAGCTACAAAGCAACAGTTTCCATTTTACAATGAGCTTCAAGCAATATTCAGTGCAAGGATGCAAAGAATGCTGTGGGCTGAAGCGGAAGGAGGATCAAAGAAGAAAGGGATGCATGCATCTTCTGAGGATGAAGAAGAGTTAGGAAATGAAGAGAGTGAAGGAGATCATAAGGGTAATATTGGCAAAAAGAAGAAGAAAAAGGGAAAAATGGTGGTAGGTGGTGGAGGAAATGATAGTGGTGGTGGTGGTAGCAACAATTTGAAGGAGATTCTTGAGGAGTTTATGAGGCAACAGATGCAAATGGAAGCTCAATGGATGGAAGCATTTGAGGCAAGGGAGAATGAGAGGAGGATGAAGGAGATGGAGTGGAGACAAACAATGGAAGCATTGGAGAATGAGAGGATGATGATGGAACAAAGATGGAGAGAGAGAGAAGAACAAAGAAGGGTTAGAGAAGAAGCTAGGGCTGAAAAGAGAGATGCATTAATCACTGCTCTTCTTGATAAGCTTACAAGAGAAGATAAGTAG 912 0.409 MDGHHLHHHQHQHHQQQQHHQQQRQQQQQHQQQQQHQQHVQNIIGTSSLNMDVTDRFPQWSIQETKEFLMIRSELDQTFMETKRNKQLWEVISNNMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEIEATKQQFPFYNELQAIFSARMQRMLWAEAEGGSKKKGMHASSEDEEELGNEESEGDHKGNIGKKKKKKGKMVVGGGGNDSGGGGSNNLKEILEEFMRQQMQMEAQWMEAFEARENERRMKEMEWRQTMEALENERMMMEQRWREREEQRRVREEARAEKRDALITALLDKLTREDK* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2963 303 MobiDBLite consensus disorder prediction 158 212 - -
Psa3g2963 303 CDD GT1 58 123 - -
Psa3g2963 303 Coils Coil 212 232 - -
Psa3g2963 303 Pfam Myb/SANT-like DNA-binding domain 59 143 IPR044822 -
Psa3g2963 303 ProSiteProfiles Myb-like domain profile. 60 116 IPR001005 -
Psa3g2963 303 MobiDBLite consensus disorder prediction 19 39 - -
Psa3g2963 303 Coils Coil 248 275 - -
Psa3g2963 303 MobiDBLite consensus disorder prediction 1 39 - -
Psa3g2963 303 Gene3D - 60 121 - -
Psa3g2963 303 PANTHER - 22 301 - -
Psa3g2963 303 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 22 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2963 Psa-Chr3 249621456 249623174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2963 35 301 Trihelix Transcription Factor Family AT2G38250 53.214 2.94e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa3g2963 Myb_DNA-bind_4 3.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2963 - - gmx:100778195 326.25