Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2931 ATGGAAAGTGTGGACAACAATAGAATAAATTTGGATTTGAGTTTGAATATTGAATATTCAGTAGAAGAAGTTTCTTCAAAAAATGGTTCTTCTGAAATTATTGTTGGTCGTAATATTATAGACGAAGTTGAAGAAATTGGAATTTCTGAGAAAGAAAATATTGTGATTTCTAGTCAAAATATTGAGATAAATGGATTTTTACAAGAAAGTAGTGAGGGTGACACTTCTAAGGAGTCAAACATTGTTCCTTTTGTTGGTCAAATTTTTCTTAGTGAGGAAGAAGCATTTATTTTTTATAAGAGATATGCATATCAACACAGGTTCTCAGTTAGAAAAGGTAGATTCATCAAACAAAATAGAATTGTGAGTAGGCGTGATTTCTTTTGCCATCGTGAAGGTAGAACTTCCTTGAAAATCATAGAACGATCGAAAGAACAAAGAAATAGAGAATCAACTAGGTGTGAATGTAAAGCTCATTTGCGAATTTCTTTGCAAAAAACTCATGATATGTTTCCAAGTGAGTGGCGAGTTACAACATTTATTGTTGATAATAATCATACTTTGTTAACTCAATCAGAAGTGCGGTTCTTACCAGTTAATCGAATTATCTCAGATGATTATTCTGAACGAATTTTCTTGTTAAAGGAAGGTGGACTTTCAGTTAGACAATTAATGCGTATCATAGAGCTAGAAAAAAATGTGGAGCATGGTTATCTTCCATTTATTGAAAAGGATGTTCGTAATCTGTTTTTGAAAGCCAAGAAAAAAGTTGAAATAACTGATGTTGTTGATCTTCTTAAGTATTGTGAGGATGTAAAGAAGAGTTGCTCTAAATTTCAGTATGCATATACACTTGACGAAGAAAGAAGGTTAGAGCATATATTTTGGTCTCATGCTTATTGTTTTGATTGGTACCAAGAATATGGCGATGTTGTTGTGTTTAATACTACATATAAGGTTCTTGCTTATCTTCGTGACTATTTCTTTGGTGGAATGACAACCACAGGTAGATCAGAGAGTATTAATGCATTTATCAAAAGATTCATAAATTCCCATACAACTTTAAGTGATTTTACAAAGCAGGTTGATTTAGCAATCAATGATATTAAGCAAAAAGAAGAGCATGAAGCTATGTTAGAAAAATGCAAAAGATTGAACATGAAGCTGATATCACCTTTGCAAGAGCAAAATCATAGTCTTCTCACATGTTTTACTTTTCAAAAGTTTCAAGAGGAGTTTGAAAGTTCCATCCAATATTCAATTCATCACCAAAATGGTAATGTGTTTGTGTTGCGGTAG 1299 0.3202 MESVDNNRINLDLSLNIEYSVEEVSSKNGSSEIIVGRNIIDEVEEIGISEKENIVISSQNIEINGFLQESSEGDTSKESNIVPFVGQIFLSEEEAFIFYKRYAYQHRFSVRKGRFIKQNRIVSRRDFFCHREGRTSLKIIERSKEQRNRESTRCECKAHLRISLQKTHDMFPSEWRVTTFIVDNNHTLLTQSEVRFLPVNRIISDDYSERIFLLKEGGLSVRQLMRIIELEKNVEHGYLPFIEKDVRNLFLKAKKKVEITDVVDLLKYCEDVKKSCSKFQYAYTLDEERRLEHIFWSHAYCFDWYQEYGDVVVFNTTYKVLAYLRDYFFGGMTTTGRSESINAFIKRFINSHTTLSDFTKQVDLAINDIKQKEEHEAMLEKCKRLNMKLISPLQEQNHSLLTCFTFQKFQEEFESSIQYSIHHQNGNVFVLR* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2931 432 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 322 425 IPR031052 GO:0006355
Psa3g2931 432 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 322 IPR031052 GO:0006355
Psa3g2931 432 Pfam FAR1 DNA-binding domain 98 189 IPR004330 -
Psa3g2931 432 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 322 425 - -
Psa3g2931 432 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 48 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2931 Psa-Chr3 245521921 245524417 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Psa3g2931 FAR1 4e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2931 - - mtr:MTR_4g035820 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2931 3 245521921 245524417 Psa3g2931 3 245521921 245524417 ECH