Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2916 ATGAAACGTTCAGCCACCACATTGTTCATCATCTTGGCGACGCTGTGTTTCCTTTTGGAATTGGAAGCCAAAACGTTCGACCCCTACAAGGTTCTTGGGGTTGATAAAACTGCAAGTCAACGTGAAATTCAGAAGGCTTTTCACAAACTCTCTCTTCAATATCACCCTGATAAGAACAAGGCCAAAGGTGCACAAGAGAAATTTTCTCAGATAAATAATGCGTATGAGATTTTATCGGATGAAGAGAAGAGAAAGAATTATGACTTATATGGAGATGAGAAAGGTAATCCTGGGTTTCAAACCGGTTATCCTGGAGGGCAGGGTGGTCCTGGATATAGTGGCTTTAACTTCAGACCCGGGGAGCAGTGGGGTAGCGGTGATCAAGGAGGTGATCAAGGAGGCGCTAAGTCATTTTCGTTTTCCTTTGGCGGCGGTGATTCAAATTCTTTTGGATTTGGTTTGGATGATCTTTTTGGAAGCTTTTTTGGTGGCAATTCATTTGGGTCTAAATCTGGGTCCAGTTTTGGGAATTCATTTAGGTCTCAATCTGGTTCCAAGAGTTCCCCCAAAAGTCTTAAAGCCATAAATTCAAATGTCTACCAGAAAGAAATAGTTGATGAAGGAATGACTTGGCTTTTGCTATCTTATTTACCTTCATTGAGGGGCATCCAACACTTTGAGTCCATTATAGGAGAGGTTTCCAGCACATTGCAAGGAGCTTTGAAGGTTGGAAGCATTAACTGTGAAAAGGAAGTCTCATTATGTAAGGAGCTTGGTGTATATTCCCGAAAAGTGCCTAGGCTTTTTGTTTATTCTTACAAGGAGAATGAAAAGGGTTCTCTGGTGGAGTATGGTGGTGACTTGTCCGTTAAGGATTTGAAGGCTTTCTGTCAACAACACTTGCCAAGATTTTCAAAACGGATTGACTTGAATCAACTTGATCAATTTAGCACTACCGGAAAGTTGCCTAGGGTGCTGCTTCTCTCCACCAAAAAGAACACTCCTGTAATCTGGCGTGTTCTTAGTGGCTTGTATCGCAAACGCATTACTTTCAGTGATGTAGAGGTTCCTGATGTTTATGATTCAAGAGTGAAAAAGCTAGGAGTTGATGCACTTCCAGCTATTGTAGGTTGGCTACCCAATGGAGAAAAGCTTATTCTGAAAACAGGGGTTTCTGTGAAAGACATGAAATCTGGTGTACAAGATCTTAGTAACATACTTGATAGTTTTGAGAAAGTAAGTAAAAAGGAAACATCAAGTCAGTCCAAGAAAGAACAAGCTGATTCAGAAGACGGACACATTCAGTTGCTTTCTCGGTCAAACTTTGAGGCTCTATGTGGGGAGAAAACTCCAGTTTGCATAATCGGTGCCTTCAGATCTTCAAAAGCAAGGGAGAAGCTAGAATCGCTTCTCTCATTGGTCTCACAGATGTCCTTGTCAAGAAAACCAAATCCAGGCGGAAGCTCTAGGGACTCTATTTCGTATGCTCTCTTAGATTCTGCAAAGCAACAAACCTTTCTTAACACATTTGACAAAACAGGTTATAAATCATCAGATAAGTTATTGATTGCGTACAAACCTCGGAAAGGAAAATTCACTGTATTTACAGGTGAAATGACAATAGAGGAAGTAGAGAATTTTATCAGCTCTATTCTAAGTGGAGATATACCCTTTAGGGAAACACAAAAGAAGCCTGTACTGAAATAG 1707 0.4077 MKRSATTLFIILATLCFLLELEAKTFDPYKVLGVDKTASQREIQKAFHKLSLQYHPDKNKAKGAQEKFSQINNAYEILSDEEKRKNYDLYGDEKGNPGFQTGYPGGQGGPGYSGFNFRPGEQWGSGDQGGDQGGAKSFSFSFGGGDSNSFGFGLDDLFGSFFGGNSFGSKSGSSFGNSFRSQSGSKSSPKSLKAINSNVYQKEIVDEGMTWLLLSYLPSLRGIQHFESIIGEVSSTLQGALKVGSINCEKEVSLCKELGVYSRKVPRLFVYSYKENEKGSLVEYGGDLSVKDLKAFCQQHLPRFSKRIDLNQLDQFSTTGKLPRVLLLSTKKNTPVIWRVLSGLYRKRITFSDVEVPDVYDSRVKKLGVDALPAIVGWLPNGEKLILKTGVSVKDMKSGVQDLSNILDSFEKVSKKETSSQSKKEQADSEDGHIQLLSRSNFEALCGEKTPVCIIGAFRSSKAREKLESLLSLVSQMSLSRKPNPGGSSRDSISYALLDSAKQQTFLNTFDKTGYKSSDKLLIAYKPRKGKFTVFTGEMTIEEVENFISSILSGDIPFRETQKKPVLK* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2916 568 Coils Coil 61 81 - -
Psa3g2916 568 ProSiteProfiles dnaJ domain profile. 27 91 IPR001623 -
Psa3g2916 568 PRINTS DnaJ domain signature 29 47 IPR001623 -
Psa3g2916 568 PRINTS DnaJ domain signature 47 62 IPR001623 -
Psa3g2916 568 PRINTS DnaJ domain signature 63 83 IPR001623 -
Psa3g2916 568 PRINTS DnaJ domain signature 83 102 IPR001623 -
Psa3g2916 568 Pfam DnaJ domain 27 88 IPR001623 -
Psa3g2916 568 Gene3D Glutaredoxin 189 309 - -
Psa3g2916 568 Gene3D DnaJ domain 25 175 IPR036869 -
Psa3g2916 568 CDD DnaJ 27 80 IPR001623 -
Psa3g2916 568 SUPERFAMILY Thioredoxin-like 196 302 IPR036249 -
Psa3g2916 568 SUPERFAMILY Chaperone J-domain 24 117 IPR036869 -
Psa3g2916 568 CDD PDI_a_family 202 296 - -
Psa3g2916 568 PANTHER DNAJ PROTEIN ERDJ3A 7 568 - -
Psa3g2916 568 PANTHER DNAJ PROTEIN ERDJ3A 7 568 - -
Psa3g2916 568 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Psa3g2916 568 SMART dnaj_3 26 83 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2916 Psa-Chr3 245131112 245134149 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2916 29 90 C2H2 Transcription Factor Family AT1G74250 42.647 3.17e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2916 - - gmx:100796871 746.503