Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2896 ATGGCTTCCGGTTTCTCAACAATGACAGAGAAGAAAAAGATTTTATTCATAATGGGTGCAACTGGAACTGGAAAAACTAAACTTTCTATTAACCTAGGTATTCAATTCCCTTCTGAAATCATTAACTCAGACAAGATTCAAGTCTATAAGGGTCTTGACATTGTGACGAATAAGATACCAGAATCCGAGCAATGTTCGATTCCACATCACATGTTAGGCATCATAAATGATCCTAATTATGATTTCACTGTGAATGAATTCTGCAAGAAAATGGTTGAAACCCTAGATGTCATTGTTGAAAATGGACATCTACCTATTATCGTAGGTGGTTCAAATTCCTACCTACAAGTACTTGTTGATGACCCAATCTATGCATTTGGTTTAAAATATAATTGTTGTTTCATCTGGGTGGATGTGTCATTGTCTGTTTTGTTTCCTTATTTGGACAAAAGAGTTAATGAAATGGTTGAGGCAGGTCTTATTGATGAAATTAGAGACTTTTTTGTCCCTGGAGCAGATTGCACAATGGGGATTAGAAGAGCAATTGGTGTTCCTGAGCTTCAACGTTATTTTGAGATAGAAAATGATGAAGATTTTGATGAGGCTCATAAAGAAAAAATACTTGAGGAATCTATTACAGAAATGAAAGAAAACACATGCATCTTGGCTGAAAATCAACTTATAAAGATTGATAACATGGTTAATAGATTTGGGTGGAAGGTGCACAAAATTGATTCTACAAAGGTCTTTGAAGCTGTTTTAAAGGGGGAAGATTATCAACATTTGTATCAAGAAATTGTGATTAAGCCAAGCATTGAGATAGTTAAGAGCTTTTTGGAGGAGGCAACAAATGAAATATAA 861 0.3461 MASGFSTMTEKKKILFIMGATGTGKTKLSINLGIQFPSEIINSDKIQVYKGLDIVTNKIPESEQCSIPHHMLGIINDPNYDFTVNEFCKKMVETLDVIVENGHLPIIVGGSNSYLQVLVDDPIYAFGLKYNCCFIWVDVSLSVLFPYLDKRVNEMVEAGLIDEIRDFFVPGADCTMGIRRAIGVPELQRYFEIENDEDFDEAHKEKILEESITEMKENTCILAENQLIKIDNMVNRFGWKVHKIDSTKVFEAVLKGEDYQHLYQEIVIKPSIEIVKSFLEEATNEI* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2896 286 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 284 IPR039657 -
Psa3g2896 286 Gene3D - 11 279 IPR027417 -
Psa3g2896 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 205 IPR027417 -
Psa3g2896 286 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 141 241 - -
Psa3g2896 286 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 284 - -
Psa3g2896 286 Pfam IPP transferase 129 227 - -
Psa3g2896 286 Pfam IPP transferase 47 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2896 Psa-Chr3 243172954 243173968 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2896 129 283 C2H2 Transcription Factor Family AT2G27760 32.778 5.89e-21 90.5