Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2892 ATGGCTTTCAGTTTCTCAACAATGGCAGAGAAGAAAAAGGTTTTGTTCATAATGGGTGCAACTGGAACTGGAAAATCTAAACTTTCTATTAACCTAGGTATTCAACTTCCTTCTGAAATCATTAACTCAGACAAAATTCAAGTCTATAAGGGTCTTGACATTGTGACAAATAAGATACCAGAATCCGAGCAATGTTCGATTCCACATCACATGTTAGGCATCATAAATGATCCTGATTATGATTTCACTGTGAATGAATTCTGCAAGAAAATGGTTGAAACCCTAGATGTCATTCTTGAAAATGGACATCTACCTATTATTGTAGGTGGTTCAAATTCCTACCTACAAGTACTTGTTGATGACCCAATCTATGCATTTGGTTTAAAATATAAATGTTGTTTCATCTGGGTGGATGTATCTTTGTCTGTTTTGTTTCCTTATTTGGACAAAAGAGTTAATGAAATGGTTGAGGCAGGTCTTATTGATGAAATTAGAGACTTTTTTATCCCTGGAGCAGATTGCACAATGGGGATTAGAAGAGCAATTGGTGTTCCTGAGCTTCAACGTTATTTTGAGATAGAAAATGCTGAAGGTTTTGATGAGGCTCATAAAGAAAAAATACTTAAGGAATCTATTACAAAAATGAAAGAAAACACATGCATCTTGGCTGAAAATCAACTCCTAAAGATTAATAACATGGTTAATAGATTTGGGTGGAAGGTGCACAAAATTGATTCTACAAAGGTCTTTGAAGCTGTTTTGAAGGGAGAAGATTATCAACATTTGCATCAAGATATTGTGGTTAAGCCAAGCCTTGAGATGGTTAAGAGATTTTTGGAGGAGACAACTCATGAAATATAA 861 0.3473 MAFSFSTMAEKKKVLFIMGATGTGKSKLSINLGIQLPSEIINSDKIQVYKGLDIVTNKIPESEQCSIPHHMLGIINDPDYDFTVNEFCKKMVETLDVILENGHLPIIVGGSNSYLQVLVDDPIYAFGLKYKCCFIWVDVSLSVLFPYLDKRVNEMVEAGLIDEIRDFFIPGADCTMGIRRAIGVPELQRYFEIENAEGFDEAHKEKILKESITKMKENTCILAENQLLKINNMVNRFGWKVHKIDSTKVFEAVLKGEDYQHLHQDIVVKPSLEMVKRFLEETTHEI* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2892 286 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 141 241 - -
Psa3g2892 286 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 285 IPR039657 -
Psa3g2892 286 Gene3D - 11 279 IPR027417 -
Psa3g2892 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 203 IPR027417 -
Psa3g2892 286 Pfam IPP transferase 129 227 - -
Psa3g2892 286 Pfam IPP transferase 47 121 - -
Psa3g2892 286 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2892 Psa-Chr3 242873185 242874045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2892 129 283 C2H2 Transcription Factor Family AT2G27760 32.222 6.11e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2892 K10760 - gmx:121173984 391.349