Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2870 ATGATTCAACAAGAAAATTTTCACTCTCCATGGCCATTAGTTTATGAAGACATAGACTCATCAACTTTTGATAATCATCATCATCATCAAGTTGTTGTTGATCCCTATAGCTTCACCATGGTAAGCCATGTTGATGATGACTATATTCCATATGGCATCATCATGGATGACCATGTTGATGATGACTATATTCCATATGACATCATCATGAATGACCATGTTGATGATTATGGTTTCAATACTCTATTAAGCACCTCAGAGAATAGTACTCTCTCTGAAATCTCCATATTCACCAATGATCATATCCAATTTCCAATTCAACAAGAAACCCTAGAACTTCCATCACTAATGGAATTTGAATCTTTTCATTCAATTTCGTGTCCCCAAATTGTTGATGTTCAAGATCATGAGTATCGAGAAGAAAGTGAAGCGAGTTTCGCTTCACAAAATCTCCTCGATAATCAGATACAAAGTTTGAATTTTCTCGGAGACAGTTGTAAAACGGTCACCAGTTCTACTTTAATCCTTGATGATTTCCCTTCAACAAAAATTTCATGTGAAGCATGGAGTCCAACACAGTCAACGAAATCGGATTTTTCCTCAATTCAACAATCACTTATTGTTCCACAAGAAAACATGGAAATTGACAACAAAGTGATTCTTCCACACTTGATGGAAGCACATGGAGAAGCCTTGGAGAAAGGACAAAAAGCACTAGCAGAAGTTCATTTGAAGTGTATAAGCCAAAAAGTGACTCCACTTGGTGATTCTCTTGAGACTCTTGCATTTTATTTGTCACAAGAAGTGACAAATCATGCAGATTATCTCAAAGGGGAAGCTCGCAAGAGTTTTGAGGAAGCTTTTAAGGTAATTTATCAAGGAAATCCAATCGGAAAAATTGCTCATTTTGCAGCTATTTCATCTATTCTTGAGGCTGCTGCTATGTTAGAAGATTGTGATGAAATTCACATAATTGACTTTTGTATTGGAAATGGTGTTCAATGGCCTTTTTTGTTAGAAGCTGTTTCAAAGATGAAGAAAAGATTGAAATTGACATCAGTTAAATGGAGTGATGAAAATTCTGAATGTGTTTGGAATTTTGAGGATACCAAAAGGGAACTTTATGAGTATGCTAAATCATGTGGTTTGAAGTTGAAGGTAGAGGAAAAAGAATTGGAAGTGTTGGTTTGTGAGATCAAAAGAATGAGCAAAAAGGGTTTGAAGAAAGAGTTTTTGGCTTTTAATTTGATGATAGGTCTTCCTCATATGGGAATGGTAAGAAGCAGAAGGAAAAGTGCTTTTGAGTTTGTAAAAGTAGCTGAGGATTTGATCAAGAACTATGGTAGCAAGGGAATGATTACTTTTGGTGATGGTGAAGCATTTGAAAAACTAAAAAATAGTATGAATTTTAAGTCATTTTATGAAGGGAATTTGTTGCATTATAAGGCCTTGTTGGAATCAATTGAGTCACAATTTTCAGAAAGATTCTCAGAAGCAAGAATTGCATGTGAGGTGTTGTTTGTTGCACCTTGTATATCTTCTCTTGATTGGTTACAAACATGGGAAGAGATGAAAAGTGATGGTAATTTTGAGGTTGGGTTTAGCTTAGAAGGTGGAAGATTGAGCAAAAATGTTTTGATGGAAGTAGGAGAAGTTTTGAGAGGAAGTGAAAGTTCATATGAGGCAAGAATTGAAGGACAAAATGAGAATGAACTTGTTTTAGAATGGAAAGGAAATCAATTATTAAGATTTTCAATTTGGAAAAATTAA 1770 0.3486 MIQQENFHSPWPLVYEDIDSSTFDNHHHHQVVVDPYSFTMVSHVDDDYIPYGIIMDDHVDDDYIPYDIIMNDHVDDYGFNTLLSTSENSTLSEISIFTNDHIQFPIQQETLELPSLMEFESFHSISCPQIVDVQDHEYREESEASFASQNLLDNQIQSLNFLGDSCKTVTSSTLILDDFPSTKISCEAWSPTQSTKSDFSSIQQSLIVPQENMEIDNKVILPHLMEAHGEALEKGQKALAEVHLKCISQKVTPLGDSLETLAFYLSQEVTNHADYLKGEARKSFEEAFKVIYQGNPIGKIAHFAAISSILEAAAMLEDCDEIHIIDFCIGNGVQWPFLLEAVSKMKKRLKLTSVKWSDENSECVWNFEDTKRELYEYAKSCGLKLKVEEKELEVLVCEIKRMSKKGLKKEFLAFNLMIGLPHMGMVRSRRKSAFEFVKVAEDLIKNYGSKGMITFGDGEAFEKLKNSMNFKSFYEGNLLHYKALLESIESQFSERFSEARIACEVLFVAPCISSLDWLQTWEEMKSDGNFEVGFSLEGGRLSKNVLMEVGEVLRGSESSYEARIEGQNENELVLEWKGNQLLRFSIWKN* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2870 589 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 48 588 IPR005202 -
Psa3g2870 589 Coils Coil 385 405 - -
Psa3g2870 589 Pfam GRAS domain family 227 588 IPR005202 -
Psa3g2870 589 ProSiteProfiles GRAS family profile. 212 588 IPR005202 -
Psa3g2870 589 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 48 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2870 Psa-Chr3 240559387 240561785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2870 240 515 GRAS Transcription Factor Family AT5G66770 25.260 6.92e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa3g2870 GRAS 6.9e-30 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2870 - - mtr:MTR_7g069740 872.463