Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2837 ATGGGTGGCTGTTGCAGCCACAATGTTTCTGCTCAAGGAAAAGTCGAAAGCGAGGTGGATGATGGAGAATATGATTATGAAGATGAGAATAGTAATGATCATGTCACGTATCAAAATGATGGATCAATGGTTCGATTTAGAGGATTTTCCAGAGCTGTATCAATGTATACTCAACAGGGTAAGAAAGGTATCAACCAAGATTCAATGACTGTTTGGGAGGATTATACCGGAGAAGAAGGAATGATCTTATGTGGTGTGTTTGATGGTCATGGTCCTCTAGGCCACAAAGTTTCGCAATTCATTCGCGACAATATTCCGTTGAAACTGTCTGCGGCAATCAAAATGGCACAACAGAAAGCCAACAGATACTATGATGCTACCGATGCAGATACCGAAACTTTTGATGATGGCCACAATGGTAGTAACCGCCGCAATAACATATCGCTGGCTTCATGGGAAGGATGTTTTCTGAAATCGTTCGATGAAATGGATGAACATCTTGCTCAGGAAGTTAACACGGATAGCTATTGCAGCGGTTGCACGGCTGTAACTTTAATTAAACAGGGTGACCAATTGATAGTTGGGAATTTGGGCGATTCTCGCGCGATTCTTTGCACAAGGGATAGAGATCAACTTATACCTGTTCAACTTACCGTTGATTTAAAACCGGATATTCCAAGTGAAGCGTCGAGAATCTTTAACTGTGAAGGAAGGGTTTTCGCTGCGGAAGAAGAACCAGACGTATACAGAATATGGATGCCCGATGATGACTGTCCTGGACTCGCTATGTCAAGAGCCTTCGGAGACTTTTGCTTAAAAGATTATGGCCTAATTGCAGCTCCAGATGTGTTTTACAGAAAAATTACCAAACAAGATGAATTTGTTGTTTTAGCAACTGATGGGATATGGGATGTGCTGACAAACAGTGAAGTAGTAAACATAGTTGCTTCGGCGCCAAGGAAGTCGATAGCAGCAAAGTTGTTAGTAAAGCGCGCTGTGAGAGCATGGAGATACAAGTATCCGGGATCGAAGGTTGACGATTGTGCAGCCATATGCTTGTTTCTTAATGATCAACCTGTTTTGTCGCATTCTCAATCAAGTATGAGTAGAAAAAGCCGACATCATCGCAGCAAGCGGTCGAAATCGCAGAGAAACGACGACAATGAAACTGTGGCAGGAAAAGTTGATGTTGAACTGGATGAAGAATGGAAAGCTCTCGGAGGGTTAGCTAGAGCAAACTCAATATCAAGACTTCCAAGGCTTGCTAGGATTATGAGTAAAAGACAATCATCTAAGCGACTTAATGGAAGTTGA 1314 0.4239 MGGCCSHNVSAQGKVESEVDDGEYDYEDENSNDHVTYQNDGSMVRFRGFSRAVSMYTQQGKKGINQDSMTVWEDYTGEEGMILCGVFDGHGPLGHKVSQFIRDNIPLKLSAAIKMAQQKANRYYDATDADTETFDDGHNGSNRRNNISLASWEGCFLKSFDEMDEHLAQEVNTDSYCSGCTAVTLIKQGDQLIVGNLGDSRAILCTRDRDQLIPVQLTVDLKPDIPSEASRIFNCEGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLIAAPDVFYRKITKQDEFVVLATDGIWDVLTNSEVVNIVASAPRKSIAAKLLVKRAVRAWRYKYPGSKVDDCAAICLFLNDQPVLSHSQSSMSRKSRHHRSKRSKSQRNDDNETVAGKVDVELDEEWKALGGLARANSISRLPRLARIMSKRQSSKRLNGS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2837 437 Pfam Protein phosphatase 2C 131 333 IPR001932 -
Psa3g2837 437 ProSiteProfiles PPM-type phosphatase domain profile. 52 355 IPR001932 -
Psa3g2837 437 SMART PP2C_4 41 353 IPR001932 -
Psa3g2837 437 CDD PP2Cc 53 355 IPR001932 -
Psa3g2837 437 MobiDBLite consensus disorder prediction 364 391 - -
Psa3g2837 437 SUPERFAMILY PP2C-like 44 357 IPR036457 -
Psa3g2837 437 PANTHER ALPHABET, ISOFORM E-RELATED 1 413 - -
Psa3g2837 437 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 413 - -
Psa3g2837 437 Gene3D - 42 357 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2837 Psa-Chr3 239107254 239109465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2837 1 383 PP2C-type Phosphatase Gene Family AT5G01700 50.653 9.64e-133 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2837 - - mtr:MTR_7g070510 717.227