Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2799 ATGCTTGGAGGACCTAGTTGGACTGTTCAATTGGGAAGAAGAGATTCAACAACAGCAAGTTTAAATTTAGCTAACTCAGATTTGCCAGGTCCATCCTCTGAATTAAGTGACCTTACAAATGCTTTCTCTACCAAAGGTTTCACAGTTGAAGAAATAGTTGCTCTTTCAGGATCACACACAATTGGTCAAGGTAGCTGCAGATTCTTCAGAAACAGGATTTACAATGAAAACAACATAGATCCCACATTTGCAAAATCATTGCAAGCAAATTGTCCTACCACAGGTGGTGATGCAAATTTGTCACCACTAGACACCACCACACCAAACACATTCGACAATGCTTATTACAAGAACTTGCAAAACAAAAAGGGTCTTTTTCACTCAGATCAAGTGCTTTTCAATGGTGGTTCAACAGACTCTCAAGTTAATTCTTATGTTAACAACCCTACAAGTTTTAGAGTTGATTTTGCCAATGCAATGATCAAAATGGGAAACCTTAGTCCACTCACTGGGTCTAGTGGTCAGATAAGGAAGAATTGTAGGAATATCAACTAA 555 0.3838 MLGGPSWTVQLGRRDSTTASLNLANSDLPGPSSELSDLTNAFSTKGFTVEEIVALSGSHTIGQGSCRFFRNRIYNENNIDPTFAKSLQANCPTTGGDANLSPLDTTTPNTFDNAYYKNLQNKKGLFHSDQVLFNGGSTDSQVNSYVNNPTSFRVDFANAMIKMGNLSPLTGSSGQIRKNCRNIN* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2799 184 Gene3D Peroxidase, domain 2 29 163 - -
Psa3g2799 184 SUPERFAMILY Heme-dependent peroxidases 2 184 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa3g2799 184 ProSiteProfiles Plant heme peroxidase family profile. 1 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g2799 184 PANTHER PEROXIDASE 2 184 - -
Psa3g2799 184 ProSitePatterns Peroxidases proximal heme-ligand signature. 51 61 IPR019793 -
Psa3g2799 184 PANTHER PEROXIDASE 72-RELATED 2 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g2799 184 Gene3D - 1 181 - -
Psa3g2799 184 PRINTS Haem peroxidase superfamily signature 3 15 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g2799 184 PRINTS Haem peroxidase superfamily signature 51 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g2799 184 PRINTS Haem peroxidase superfamily signature 104 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g2799 184 Pfam Peroxidase 2 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g2799 184 PRINTS Plant peroxidase signature 3 18 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g2799 184 PRINTS Plant peroxidase signature 50 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g2799 184 PRINTS Plant peroxidase signature 102 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g2799 184 PRINTS Plant peroxidase signature 118 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g2799 184 PRINTS Plant peroxidase signature 158 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2799 Psa-Chr3 234442826 234446303 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2799 2 184 Peroxidase AT5G05340 59.459 3.84e-75 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2799 K00430 - gmx:100815142 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2799 3 234442826 234446303 Psa3g2799 3 234442826 234446303 ECH