Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2774 ATGTACAAGGGAAGATTTTGCACTTCTGGTGGGATTAAGGCTCCACTTGGATATGTCGAAACCGATCCTTCTGGTCGATATGGCCGTTTTAGGGACATTCTTGGGAGAGGAGCAATGAAAACTGTGTATAGAGCATTTGATGAGTTCCTTGGGATCGAAGTTGCTTGGAACCAAGTCAAGCTTGGTGATGTTTTTCATTCACCAGAGCAAATTCAACGCCTTTATTCAGAAGTTCATCTCCTTAAGCACCTCCACCATAAATCCATGATGATCTTCTATGGTTCTTGGATTGATGTCAATGGCAAAACATTCAACTTCATCACTGAATTGTTCACCTCGGGCACACTTAGAGAGTATAGGCAAAAATATAAGAAAGTAGATATTCAAGCATTGAAGAATTGGACACGCCAAATTCTAAGTGGTTTGGAGTATTTACACACCAATAATCCTCCTGTGATACATAGAGACCTCAAATGTGATAACATATTTGTCAATGGCCATAAAGGAGAGGTCAAGATTGGTGATTTAGGCCTTGCAGCTATACTTTGCAAATCCCAACTTGCTCAAAGTGTCATAGGTACACCAGAGTTTATGGCACCAGAACTATACGAAGAGAAATACAACGAACTAGTAGATATATATTCCTTCGGAATGTGTATGATAGAGATGCTTACTCTCGAGTTTCCATACAACGAGTGTTCCAACCCAGCTCAGATATACAAGAAAGTAACATCGGGGAAGCTACCAAATGCATTTTTCAGAATCAAAGATTTAGAAGCCCAAAAGTTTGTGGGAAGATGTTTGGCCCATGTCTCAAAGAGACCATCAGCAAAGGAACTATTGTTGGACCCATTTTTAGCCACAAAACAACATGAAGTGCCATTGCTAAACACAACTACAAATCAAACTCTCAAAGTTAATTCCACTCAAGCACTTGCCAATTATAAACATCTTTCTATAGGTGATCCAACAACAAGTATAAAGATGAAAATCACTGGATCCATAAATGAAGAGGATAACACAATTTTCCTTAAAGTGCGAATATGTGATGAAATAGGAAAACCAAGGCATATATTCTTTCCATTTGACACGAAAAACGACACACCTATTAAGGTGGCAATGGAGATGGTAGAAGAACTTGAAATTTGTCATTTAGAACCATTGGAGATTGCTGCAATGATAGATAATGAGATATCAAATTTATTTCCAACTTGGATAGGTACTCATGGCAAGTGCGAACATCAACTACAACATAGCTTTAACTACGAAGACGACGAGGATCTTAATAACCATAACCCTTTCGTCGTATCATCATCGTCTTGTCCTTCTTCCCCTCATGATTCTCTAAGCTCAATGAACTCCTACCAGTGTTCAACTTTCAGATATCATCATCATGAAGATGAGCATGGGAAAACAATAGAAGAAGAAGAAGATGATGAAGCAAAACATAACAAGCTAAGATCTTGTAGATGTGGTGGCCGTGAATCGAGGCGTCACGGATGGTTGACGATAATGAAGAATGGTTCAAACATGGAGGAGCATAGGAGCATGCAGCTTCAGAGATGGGAACTACTGGAAGAGGTGCACAAGAGACGGATGTTCAACACGGTTGCTACCATGGAGGGGATTGGATTTCAACAGCCAGATGGAGGTGGACATCATCGTCGTGCCCGTTGA 1677 0.4007 MYKGRFCTSGGIKAPLGYVETDPSGRYGRFRDILGRGAMKTVYRAFDEFLGIEVAWNQVKLGDVFHSPEQIQRLYSEVHLLKHLHHKSMMIFYGSWIDVNGKTFNFITELFTSGTLREYRQKYKKVDIQALKNWTRQILSGLEYLHTNNPPVIHRDLKCDNIFVNGHKGEVKIGDLGLAAILCKSQLAQSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIEMLTLEFPYNECSNPAQIYKKVTSGKLPNAFFRIKDLEAQKFVGRCLAHVSKRPSAKELLLDPFLATKQHEVPLLNTTTNQTLKVNSTQALANYKHLSIGDPTTSIKMKITGSINEEDNTIFLKVRICDEIGKPRHIFFPFDTKNDTPIKVAMEMVEELEICHLEPLEIAAMIDNEISNLFPTWIGTHGKCEHQLQHSFNYEDDEDLNNHNPFVVSSSSCPSSPHDSLSSMNSYQCSTFRYHHHEDEHGKTIEEEEDDEAKHNKLRSCRCGGRESRRHGWLTIMKNGSNMEEHRSMQLQRWELLEEVHKRRMFNTVATMEGIGFQQPDGGGHHRRAR* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2774 558 PANTHER WNK KINASE 1 450 - -
Psa3g2774 558 PANTHER WNK KINASE 448 549 - -
Psa3g2774 558 Gene3D Transferase(Phosphotransferase) domain 1 111 293 - -
Psa3g2774 558 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 450 - -
Psa3g2774 558 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 448 549 - -
Psa3g2774 558 SUPERFAMILY Protein kinase-like (PK-like) 30 287 IPR011009 -
Psa3g2774 558 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2774 558 CDD STKc_WNK 26 286 - -
Psa3g2774 558 Gene3D Phosphorylase Kinase; domain 1 14 109 - -
Psa3g2774 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Psa3g2774 558 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2774 558 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2774 Psa-Chr3 231824123 231826806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2774 16 427 MAP Kinase Kinase Kinase AT3G51630 65.789 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Psa3g2774 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2774 K08867 - gmx:100272206 709.138