Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2771 ATGAGTTCTAATCAACCACTGCTTTCCGAGCCAGATCTTGTTCCTCCAGTGATTCATCACCGCCGGAGATCAGGATCCCGCACTACCTTCTTTGACGAAGCCGCATTAACTCCTCCAACCGCGGACCACCACCAGGAAGTCGTGTTTGCAACGGATTGCAGCTTCCACTCCGCTTTCTGCAACAGCACCGCCACAAACAACAGCAGCAGCGTTTCCATTTCAGAACCCCCTTTAACAGAGTTTCAAAACCCTGATTCACGATTTCCTTTGGAATGCCCCACGCGGGAAAGGGGACGCCTGCGATCCTGGGGTGCAATGGAACTGCACGATGCTAGTACTGTGCCCTTTGAAATTTCACTACAATCATCAGCCCCAGCAGCAACTACAACTCGCAGGATTCGTCATAAAAGTGTGCAGTTTGATGAGCAGATCTTACATGAGGATAATGCCAGGTTGATTTATATAAATGATCCTAAGAAAACCAATGATAAGTATGAGTTTACTGGGAATGAGATTCGAACTAGTAGATACACTTTTATCACATTCTTGCCGAAGAATTTATTTATTCAGTTCCATAGGGTTGCTTATCTGTATTTCCTTGCTATTGCTGCACTCAATCAGCTTCCTCCCTTAGCTGTATTTGGGAGGACGGTGTCCCTTTTCCCGCTTTTGTTTGTTCTTTGTGTTACTGCTATCAAGGATGGGTATGAGGATTGGAGGAGACATAGGTCGGATAACAATGAGAATAATCGTGAGTCTCTGGTTCTTCAGTCTGGTGATTTCCGGTCCATGATATGGAAAAGGATTCAGGCTGGTGAGGTTGTTAAGATCTTTGCTGATGAGACCATTCCTGCTGATATGGTCTTGTTAGGGACAAGTGACCCGAGTGGGCTTGCCTATATTCAGACGATGAATTTGGATGGAGAATCAAATTTGAAGACAAGGTATGCCAAGCAAGAAACCGCTTCTATGGTATCTTCAGAGGTTTGTGACGTTTCTGGGATTATTAGATGCGAGCAGCCAAACCGGAATATTTATGAGTTCACAGCTAATATGGAGTTCAATGGAATTAAGTTTTCCCTTAGCCAGTCAAACATTGTCCTGCGAGGTTGCCAACTGAAGAACACAGATTGGATAATTGGTGTTGTGGTTTATGCTGGACAGGAAACAAAAGCCATGCTGAACAGTGCGGCTTCTCCTTCCAAGAGAAGCAGACTGGAAGGTTATATGAATAGAGAAACCCTTTGGTTGTCGATTTTTCTTTTCATCATGTGTATGGTTGTGGCCATTGGGATGTGTCTTTGGCTGGTACGTCACAAGAACCAGCTTGATACCTTGCCTTACTACCGAAAAACATACCTCAACAATGGTCCAGATAAAGGAAAGAAATATAAGTATTATGGGATACCAATGGAAACATTTTTCTCCTTTTTGAGTTCTGTTATAGTGTTTCAGATAATGATACCCATATCTCTTTACATCACAATGGAGTTGGTTAGGTTGGGCCAGTCATACTTCATGATTGAAGACATGGATATGTATGACCCTAGCTCTGGATCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTATTTTCAGACAAGACAGGAACACTAACAGAAAACAAGATGGAATTCCGGAGGGCTAGTGTACACGGGAAGAATTATGGGAGCTCCTTGGTTACTACTGATAATAGTTCAGCAACAGCTGTTATTCCGAAACGGAGATGGAAACTCAAATCTGAAATTGCAGTTGATCCCAAACTAATGAGCATGCTGCATAGAAACTCAAATAGAGATGAAAGAATAACTGCTCATGAGTTTTTTCTTACATTGGCTGCTTGTAATACTGTGATTCCTATACTTACTAATGGTGGATTTTCTGGTTGTGGAACAAGTGAATCAAATGGATATGTAGAATGCATTGATTACCAGGGTGAGTCCCCTGATGAACAAGCTCTAGTTTCTGCGGCCTCTGCATATGGATACACTCTTTTTGAGCGGACATCTGGACATATTGTTATTGACATCAACGGTGAGAAACTCAGGTTGGACGTGTTGGGCCTGCATGAATTTGATAGTGTGCGAAAGAGAATGTCTGTTGTTATTCGGTTTCCTGACAATGTGGTAAAGGTGCTAGTCAAAGGTGCTGATACATCAATGTTTAGCATTTTGGCAAATGGCAGTGAGAGCAACTGTAGCTTATTGCATGCAACTCAGAGCCATTTGGGTGAATACTCATCACAAGGTTTGCGAACCCTTGTGGTTGCCTCTAGAAGTCTTTCTGATGCTGAACTTGAGGAGTGGCAAAGCAGGTATGGAGAGGCTAGCACCGCGTTAACTGACAGAGCTACTAAACTACGTCAAACTGCAGCTCTTATAGAATGCAATTTAAATCTACTTGGAGCAACTGGAATTGAGGACAAGCTGCAAGAGGGTGTACCAGAAGCCATTGAGTCCCTACGACAAGCTGGAATCAAGGTGTGGGTTCTTACCGGTGATAAACAAGAGACAGCAATTTCAATTGGTCTTTCCTGCAAACTTCTCAGTGCAGATATGCAGCAAATTGTTATAAATGGTACTTCAGAGGAGGAATGCAGAAATCTTTTGGGTGATGCAATAGCCAAATATGCTGTGAGATGTTCAAGTAGAGGGCATCGGAATCTGAAGCATAAAACCAATGCTGAACATGGCGCTCTTGATATTCCTAATTGTTCAAAGTCAATGAGTTTGCCCAAATGGAATCCAGGGAAGGAAGAAGGAACTGATACTCCATTGGCACTCATAATTGATGGGAATAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTTGACCTTGCAATTTCCTGTAAGGTTGTACTTTGTTGCCGTGTTGCACCCTTGCAGAAGGCTGGAATTGTTGATCTGATAAAGAGCCGCACAGATGATATGACGCTGGCCATAGGTGATGGGGCAAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGACGTCAAGCGGTGATGGCGTCAGATTTCGCGATGGGACAATTTCAGTTCTTGAAAAGATTACTTCTTGTTCATGGACACTGGAATTACCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTAATGTTATTTTGGTATATATTATGCACGGCTTTTTCTACAACTTCTGCATTAACAGATTGGAGTAGTGTATTCTATTCCGTGCTATACACATCTGTGCCCACAATTTTTGTTGGTATTTTGGACAAAGACTTGAGTCATAGGACACTTTTGCAGTATCCGAAACTGTATAGTACTGGTTACAGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACAATGCTTGACACAAGCCTTGTTCTCTTTTACACACCGTTGTTTACCTATAAGGATAGTTCGATCGATATATGGAGCATGGGGAGCTTGTGGACAATTGCAGTTGTTATCCTTGTAAATGTGCACCTGGCTATGGACATCAACCGGTGGTTATTAATTTCTCATATTGCTGTCTGGGGATCCGTAGTAATTACATATGGTTGCATGGTGATATTGGATTCCATACCGGTCTTTCCTAATTACTGGACTATTTATCATCTGGCAACGTCCCCTACATATTGGATAACAATTTTGCTTATAATAATTGTGGCGTTGCTACCTCGCTTTATTTGCAAAGTTTTTTGTCAAATCTTCTGGCCTTCAGATATCCAGATAGCAAGAGAAGCCGAGTTAATGAAAAAACGACACAATCGTTTGCAGTCAAGGCATCAAGGTTCCAGTTAA 3855 0.4208 MSSNQPLLSEPDLVPPVIHHRRRSGSRTTFFDEAALTPPTADHHQEVVFATDCSFHSAFCNSTATNNSSSVSISEPPLTEFQNPDSRFPLECPTRERGRLRSWGAMELHDASTVPFEISLQSSAPAATTTRRIRHKSVQFDEQILHEDNARLIYINDPKKTNDKYEFTGNEIRTSRYTFITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDNNENNRESLVLQSGDFRSMIWKRIQAGEVVKIFADETIPADMVLLGTSDPSGLAYIQTMNLDGESNLKTRYAKQETASMVSSEVCDVSGIIRCEQPNRNIYEFTANMEFNGIKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLEGYMNRETLWLSIFLFIMCMVVAIGMCLWLVRHKNQLDTLPYYRKTYLNNGPDKGKKYKYYGIPMETFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDMDMYDPSSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVHGKNYGSSLVTTDNSSATAVIPKRRWKLKSEIAVDPKLMSMLHRNSNRDERITAHEFFLTLAACNTVIPILTNGGFSGCGTSESNGYVECIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNVVKVLVKGADTSMFSILANGSESNCSLLHATQSHLGEYSSQGLRTLVVASRSLSDAELEEWQSRYGEASTALTDRATKLRQTAALIECNLNLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQQIVINGTSEEECRNLLGDAIAKYAVRCSSRGHRNLKHKTNAEHGALDIPNCSKSMSLPKWNPGKEEGTDTPLALIIDGNSLVYILEKELESELFDLAISCKVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVLYTSVPTIFVGILDKDLSHRTLLQYPKLYSTGYRQEAYNMQLFWITMLDTSLVLFYTPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLAMDINRWLLISHIAVWGSVVITYGCMVILDSIPVFPNYWTIYHLATSPTYWITILLIIIVALLPRFICKVFCQIFWPSDIQIAREAELMKKRHNRLQSRHQGSS* 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2771 1284 PRINTS P-type cation-transporting ATPase superfamily signature 540 554 - -
Psa3g2771 1284 PRINTS P-type cation-transporting ATPase superfamily signature 993 1012 - -
Psa3g2771 1284 SUPERFAMILY Calcium ATPase, transduction domain A 250 392 IPR008250 -
Psa3g2771 1284 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 959 1079 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa3g2771 1284 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 473 564 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa3g2771 1284 MobiDBLite consensus disorder prediction 1 25 - -
Psa3g2771 1284 Pfam E1-E2 ATPase 251 498 - -
Psa3g2771 1284 CDD P-type_ATPase_APLT_Dnf-like 169 1150 - -
Psa3g2771 1284 SFLD p-type atpase 524 1044 IPR044492 -
Psa3g2771 1284 SUPERFAMILY HAD-like 527 1038 IPR036412 -
Psa3g2771 1284 Gene3D - 649 783 IPR023299 GO:0000166
Psa3g2771 1284 Pfam Cation transport ATPase (P-type) 656 730 - -
Psa3g2771 1284 Gene3D - 226 396 - -
Psa3g2771 1284 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 143 1281 - -
Psa3g2771 1284 Pfam Phospholipid-translocating ATPase N-terminal 153 218 IPR032631 -
Psa3g2771 1284 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1257 IPR023298 -
Psa3g2771 1284 ProSitePatterns E1-E2 ATPases phosphorylation site. 542 548 IPR018303 -
Psa3g2771 1284 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 167 1265 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Psa3g2771 1284 Gene3D - 806 1033 IPR023214 -
Psa3g2771 1284 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 143 1281 - -
Psa3g2771 1284 Pfam Phospholipid-translocating P-type ATPase C-terminal 1021 1258 IPR032630 -
Psa3g2771 1284 SFLD Haloacid Dehalogenase 524 1044 - -
Psa3g2771 1284 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 546 822 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2771 Psa-Chr3 231574778 231581325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2771 130 1267 Primary Pumps ATPases AT5G04930 56.484 0.0 1310