Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2749 ATGGGGTGTTTCACGGTAAAGAAGAGCAAGAAGAAGAAGTCTGATCAATTTGCTTATGTAAAACGCATAAGCCATAACGACCATGCACCTTCGGTGCTTCCTGAACCTCAAACTCCTACTCGTTCACTACAGTCTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACCTGTTAATAAAGTTGCTAACAATAGAGCACGGGCATTATCTGCTCCATCAACTCTTGATGCAGCAGATCAAGATGCTTTGGCCTCAATTGAGTATGAGGAACAAGAAGAGTCAAGATACCGAGGAGGAGGAGGAGGAGGATCAATGAAGGAACAACGTTCTGCTAGTCCACAACCTTTACCTCTTCCATCTCCTCAGGGAGGTAGTACACTGAAAGCTATTGGCAGCTTTAAGTTGGGAACTGCTAGTGGTCCTCTACATGCATCCGGACCTTTGCCGCTTCCACCTACTGGTTCACTTAGGAATTTTCCGTATGAGGAAGTTGCTACTGCTTGCCACAATTTCTCTTCTGATCGATGCATGTCTGAGTGTCTTTCATCCACCATATACAAAGCTTACTTCGGTGATGATCCTTCAAGTTCAAAGAAATTTGAAGCCACTGTCACACGCCTTCACCCATCATCTCAGGGCTCGAAGGAATTCATAAACGAGGTCAATACTCTCGCAACTTTGCAACATCCAAACCTTTGTAAACTACTAGGATTTCATGCACGTGATAGTTCAGAACATAGAATGTTGGTCTATGAGAGGCTATACCATGGAAGCTTGGACCGCCTATTGTATGGTAGATCTGATGGACCATCAATTGATTGGAATACAAGAATGAAAATTGCAATGTGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTTTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCTAAGCTTTCCGGGTATGGTTGTGTCGGACATATTCCCGAGGAAGAAATTTCAAGCAGTTCATCTGCTGTTGGAAACCTATCAATGGAGACACTGGAGAAAGGAATGCTCACACCAAAGAGCAATGTGTGGAGCTTTGGAATTTTTCTTCTGGAATTACTTACCGGAAGAAAGAATCTCGATAGTCGTCACCCCAAGGAAGAGAGGAATTTAGTCAAATGGAGCAAACCTTTCTTAGCTGATAATTATCGTTTATCATTGATCATGGACCCTCAACTCAAAGGCCGCTTTCCATCCAAAGCAGCAAGAACAATAGCCGACATTGCACAAAGATGTCTCCAAAAGGAGCCATCAGATCGACCAACTATGAGAACTGTTGTCGAGCATCTCAAAACGATACAGGATTTGAAGTACTCTTGCAGGTTCCCACTTCAAGAACCGGCACCATCATCTGGAAAAGAAATGTTTAGATCACCGAGCCTTAATGGTATCGTATGCCCTGCACCTAGGTTGAGTTTCTCTCCTTCACGGCCATCTGTAGCCCCGCCATCTGTTTCTCCTCCAAGATGGTCCGGCGTGCCTATCCCCCCACCTAGAGCTTGTTCGACTCTCTCTTTGGAAGAGCTCGAAAGGCAAGAAAGCCGTAAGTCATCGTCCTCGGCCTCTCGGAGGGTTAGTGTTGAAGGATTTTTAGTGTCTATATAA 1659 0.4442 MGCFTVKKSKKKKSDQFAYVKRISHNDHAPSVLPEPQTPTRSLQSAPPSFRTRVKPIQPVNKVANNRARALSAPSTLDAADQDALASIEYEEQEESRYRGGGGGGSMKEQRSASPQPLPLPSPQGGSTLKAIGSFKLGTASGPLHASGPLPLPPTGSLRNFPYEEVATACHNFSSDRCMSECLSSTIYKAYFGDDPSSSKKFEATVTRLHPSSQGSKEFINEVNTLATLQHPNLCKLLGFHARDSSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAMCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSKPFLADNYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSDRPTMRTVVEHLKTIQDLKYSCRFPLQEPAPSSGKEMFRSPSLNGIVCPAPRLSFSPSRPSVAPPSVSPPRWSGVPIPPPRACSTLSLEELERQESRKSSSSASRRVSVEGFLVSI* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2749 552 MobiDBLite consensus disorder prediction 23 121 - -
Psa3g2749 552 ProSiteProfiles Protein kinase domain profile. 173 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2749 552 Gene3D Phosphorylase Kinase; domain 1 154 254 - -
Psa3g2749 552 Gene3D Transferase(Phosphotransferase) domain 1 256 459 - -
Psa3g2749 552 PANTHER OS01G0588500 PROTEIN-RELATED 44 547 - -
Psa3g2749 552 MobiDBLite consensus disorder prediction 31 51 - -
Psa3g2749 552 SUPERFAMILY Protein kinase-like (PK-like) 152 459 IPR011009 -
Psa3g2749 552 Pfam Protein tyrosine and serine/threonine kinase 186 448 IPR001245 GO:0004672|GO:0006468
Psa3g2749 552 PANTHER OS01G0822200 PROTEIN 44 547 - -
Psa3g2749 552 MobiDBLite consensus disorder prediction 525 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2749 Psa-Chr3 230609472 230614367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2749 152 452 Receptor kinase-like Gene Family AT4G02010 38.111 2.85e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Psa3g2749 PK_Tyr_Ser-Thr 9.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2749 - - gmx:100809117 880.552