Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2740 ATGTTTCATTCTATGATGAATCTGTTGTTTTTCACACTTTTTACTACTTCAGTTACAATTCAAGTGTTTTCTGTTGATGATCCTGTTTTCAATGATGATATATTGGGCTTAATTGTGTTTAAAGCTGGTTTACAAGACCCTAATCACAAACTCTCTTCATGGAATGATGATGATTACACACCATGCAATTGGGAAGGTGTGAAATGTGATTCTTCAAACAATAGAGTCAATTCTCTTGTTCTTGATGGTTTCTCTCTTTCAGGACACATTGATAGAGGGTTATTAAGATTACAGTATCTTCAAATTTTATCACTTTCTGGTAACAATTTCACAGGTTTCATAAACCCCGATCTTCCAAAACTTGGAAGTTTAGAAGCTGTTGATTTCAGTGATAACAATCTTCAAGGGTCAGTTCCTGAGGAGTTTTTCCAACAATGTGGATCTTTGAAAAATGTTAACTTTGCTAAGAATAATCTCACAGGTAATGTTCCTGATTCTCTTAGTAGTTGCTCATCTTTGACAAATGTTAACTTTTCTTCTAATCAAATGTATGGAAAATTGCCATCTGGGGTGTGGTTTTTGAGAGGTTTACAATCATTTGATGTTTCAAATAACTTGCTTGAGGGAGAGATTGTTCTTGAGGGGATTCAAAATCTTTATGGTTTGAGAGAATTGAGTTTGAGGAAAAACCGATTTAGCGGTCGAATTCCCGAGGAGATTGGTGGTTGCATAGGTTTGAAATCACTTGATTTGAGTGGTAATTTTCTCTCTGGTGGAATTCCTCAATCAATGCAAAGACTCAATTCATGTAATTCTATCAGTTTGCAAGAAAACTCATTCACTGGTAACATTCCTGATTGGATTGGCGAGATGAAAGGTCTCGAAAATTTGGATCTTTCTTCGAATAGATTTTCGGGTTGGATTCCGAAGTCATTAGGGAAACTAGAAATGTTGCAAAGGTTGAATTTTTCTAGGAATCAGTTAACAGGAAACTTGCCCGATTCGATGATAAACTGTACTAATCTTTTGGCTTTCGATATCAGTCACAATAATTTAGATGGTTATCTTCCTTCGTGGATTTTTACGAAGGGTAACTATCACGGTCTCGAGGTTTTGGATTTGTCTACCAATGGATTTTCTGGTGGAATTCCGTCTGGTATCGGCGGACTTCGTAGCCTGAAACTATTGAATATGTCTTCGAACAGTTTCTACGGTTCCGTTCCGGTTGGTATCGGTGAACTCAAATCTTTATACATTGTTGATTTGAGTGATAATAAACTTAATGGAAGCATTCCGTTTGAAATCGAAGGTGCGGTTTTCCTTAATGAGTTGAGGCTACAGAAGAATTTCCTCGGTGGGAGGATTCCAGATCGAATCGCGAAGTGTTCGGCTCTAACATCTTTGGTTCTTTCTCACAACAAGCTTACTGGTTCAATTCCTAAGGGCATTGCCAACCTAACGAATCTTCGGCATGTAGATTTGTCGTGGAACAAACTCTCTGGAAGTTTACCGAAGGAGTTAACGAATCTTTCGAATCTTTTATCGTTTAATGTATCCTACAACCACCTTAAGGGTGAGTTACCGGTCGGCGGTTTCTTCAACACCATCTCATCCTCATCTGTAACCGGGAACTTGCTGTGTGGTTCTGTTGTCAACCACTCCTGTCCATCGGTTCATCCCAAACCGATTGTCTTGAATCCGAATTCCTCTGCTTCAAACTCCAGCATTTCCTCGAAATATCACCGGCACAAGATCATACTCAGTATTTCTGCTCTTATTGCTATTGGTGCAGCTGGTTTAATTGCCGTTGGTGTTGTCGCTATCACTTTCCTAAACATGCGCGCCCGTTCTTCAATGGAACGTTCGGCTGCTCCGTTTGCTTTCTCCGGTGGCGATGACTATAGCAACTCACCGGCAAATGATCCAAACTACGGGAAGCTTGTGATGTTTTCCGGTGATGCAGACTTTGCTGACGGAGCTCACAATCTCCTTAATAAAGACAGTGAAATAGGCCGTGGTGGATTCGGAGTTGTTTACCGCACGTTTCTACGAGACGGGCACGCTGTTGCGATCAAAAAGCTTACAGTCTCGAGTTTGATCAAGTCTCAAGAAGAATTCGAGAAGGAAGTGAAAAGGTTCGGGAAGATTCGGCACGATAATCTTCTAGCACTTGAAGGCTATTACTGGACTTCGTCGCTGCAGCTCCTCATCTACAAGTTCCAATCAAGCGGTAGTCTGCATAACCTTCTACACGGCGATAAAACCAAAAACGTCTTATCATGGCGACAAAGGTTCAAGATTATACTCGGCATGGCAAAAGGGCTAGCGCATTTACACGAGTCGAACGTAATCCACTATAATCTCAAATCAACCAACGTCCTCTTCGACGTCTCAGACGAACCAAAGATAGGCGACTTCGGCTTGGTGAAGCTCTTACCAATGCTAGACCATTGCGTATTAAGCAGCAAAATCCAAAGCGCGCTCGGATACATGGCTCCCGAGTTCGCTTGCCGCACGGTTAAGATAACCGAGAAATGCGACGTGTACGGATTCGGAATCCTTATTTTGGAGATAGTAACAGGTAAAAAGCCTGTGGAGTACATGGAAGATGATGTGGTGGTTCTATGTGACATGGTTAGAGGTGCATTGGAAGAAGGAAAAGTTGAAGAATGTGTTGATGAAAAGCTTTTAGGCAATTTTGCTGCAGAAGAAGCGATTCCTGTGGTAAAACTGGGATTGATTTGTGCATCACAAGTTCCATCAAATAGGCCTGATATGAGTGAGGTTATAAACATATTAGAGTTGATTCAGTGCCCTTCAGAAGGACAAGAGGAGTTATTAGAATGA 2847 0.4106 MFHSMMNLLFFTLFTTSVTIQVFSVDDPVFNDDILGLIVFKAGLQDPNHKLSSWNDDDYTPCNWEGVKCDSSNNRVNSLVLDGFSLSGHIDRGLLRLQYLQILSLSGNNFTGFINPDLPKLGSLEAVDFSDNNLQGSVPEEFFQQCGSLKNVNFAKNNLTGNVPDSLSSCSSLTNVNFSSNQMYGKLPSGVWFLRGLQSFDVSNNLLEGEIVLEGIQNLYGLRELSLRKNRFSGRIPEEIGGCIGLKSLDLSGNFLSGGIPQSMQRLNSCNSISLQENSFTGNIPDWIGEMKGLENLDLSSNRFSGWIPKSLGKLEMLQRLNFSRNQLTGNLPDSMINCTNLLAFDISHNNLDGYLPSWIFTKGNYHGLEVLDLSTNGFSGGIPSGIGGLRSLKLLNMSSNSFYGSVPVGIGELKSLYIVDLSDNKLNGSIPFEIEGAVFLNELRLQKNFLGGRIPDRIAKCSALTSLVLSHNKLTGSIPKGIANLTNLRHVDLSWNKLSGSLPKELTNLSNLLSFNVSYNHLKGELPVGGFFNTISSSSVTGNLLCGSVVNHSCPSVHPKPIVLNPNSSASNSSISSKYHRHKIILSISALIAIGAAGLIAVGVVAITFLNMRARSSMERSAAPFAFSGGDDYSNSPANDPNYGKLVMFSGDADFADGAHNLLNKDSEIGRGGFGVVYRTFLRDGHAVAIKKLTVSSLIKSQEEFEKEVKRFGKIRHDNLLALEGYYWTSSLQLLIYKFQSSGSLHNLLHGDKTKNVLSWRQRFKIILGMAKGLAHLHESNVIHYNLKSTNVLFDVSDEPKIGDFGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILILEIVTGKKPVEYMEDDVVVLCDMVRGALEEGKVEECVDEKLLGNFAAEEAIPVVKLGLICASQVPSNRPDMSEVINILELIQCPSEGQEELLE* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2740 948 Gene3D Ribonuclease Inhibitor 214 268 IPR032675 -
Psa3g2740 948 Gene3D Ribonuclease Inhibitor 35 143 IPR032675 -
Psa3g2740 948 Gene3D Ribonuclease Inhibitor 144 213 IPR032675 -
Psa3g2740 948 SUPERFAMILY Protein kinase-like (PK-like) 665 937 IPR011009 -
Psa3g2740 948 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 13 938 - -
Psa3g2740 948 Gene3D Phosphorylase Kinase; domain 1 653 740 - -
Psa3g2740 948 SMART LRR_typ_2 219 243 IPR003591 -
Psa3g2740 948 SMART LRR_typ_2 390 414 IPR003591 -
Psa3g2740 948 SMART LRR_typ_2 510 534 IPR003591 -
Psa3g2740 948 SMART LRR_typ_2 315 339 IPR003591 -
Psa3g2740 948 SMART LRR_typ_2 121 145 IPR003591 -
Psa3g2740 948 SMART LRR_typ_2 486 509 IPR003591 -
Psa3g2740 948 SMART LRR_typ_2 291 314 IPR003591 -
Psa3g2740 948 ProSiteProfiles Protein kinase domain profile. 664 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2740 948 Gene3D Ribonuclease Inhibitor 269 558 IPR032675 -
Psa3g2740 948 Pfam Leucine Rich Repeat 246 267 IPR001611 GO:0005515
Psa3g2740 948 ProSitePatterns Protein kinases ATP-binding region signature. 670 693 IPR017441 GO:0005524
Psa3g2740 948 SUPERFAMILY L domain-like 31 281 - -
Psa3g2740 948 Pfam Leucine rich repeat 441 499 IPR001611 GO:0005515
Psa3g2740 948 Pfam Leucine rich repeat 293 352 IPR001611 GO:0005515
Psa3g2740 948 Gene3D Transferase(Phosphotransferase) domain 1 742 945 - -
Psa3g2740 948 SUPERFAMILY L domain-like 231 529 - -
Psa3g2740 948 CDD STKc_IRAK 670 936 - -
Psa3g2740 948 Pfam Protein tyrosine and serine/threonine kinase 665 873 IPR001245 GO:0004672|GO:0006468
Psa3g2740 948 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 13 938 - -
Psa3g2740 948 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2740 Psa-Chr3 229907913 229912304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2740 5 946 Receptor kinase-like Gene Family AT3G56370 60.332 0.0 1102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Psa3g2740 PK_Tyr_Ser-Thr 1.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2740 - - mtr:MTR_7g073290 1605.11