Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2738 ATGAGTTCAACAACCACTGGAGCATACTTGGTTTCCTGTAATTCGGGAAACAAGAACAACGGTCTCTTCTGCTGGATTTTGATCTGTTTGCTACCAAAATTCTTGGGAACTGCCTTTGCATACATCAACTTCCTTCTCATTCAGGCTATTGATAGGAGTCCATCTGCAGTGAGGTTTTCGGGTATGAGTGTGGCTGGCATGTGTAAACCGTTGCTCTTTCCTGTTAATGATCCTGGTACTGTAACCACGGATCACATTGAGATGGATTTTTCTGATGTTTTTGGTCCTCTTACTGTGGAAGTCAATAACATTGACAACCCTTCTTTTGACTCGGTTGATGAATCGAGCGAGCTGGTTTATGATGACCCGGAAGTCATCTTTGCTCGATCACATTCTCTTGTTGGTCCTTCTAATTGTGTTAGTCAGTCACTCAAACTCAGTAAGCTTACCATACATGAGTCTGACTCTGACAATTTGTTGGAACTAGTGGAGAGTGTTACTGAAGAGGCCATTGAAGACATCAAAGAGGTTATCAATGAGGAATCTTTGAATGATGAAGACAGGAGCCTCGTGGAGATCGAAAGAGTTAGCATTGACGATTTTGAGGTTTTGAAGGTTGTGGGGCAGGGTGCATTTGCTAAAGTATATCAGGTGAGGAAAAAGGGCACTTCTGAAATATATGCTATGAAGGTTATGCGGAAGGATAAGATTATGGAGAAAAACCATGCCGAATACATGAAAGCCGAGAGGGAGATTTTGACAAAGATTGAGCACCCCTTTGTTGTGCAACTTAGATACTCTTTTCAGACAAAATACAGATTGTATCTTGTGCTGGATTTTGTAAATGGGGGCCATCTCTTCTTTCAGCTTTATCACCAGGGTCTTTTCAGAGAGGATCTTGCACGCATATATGCCGCCGAGATTGTTTCTGCAGTTTCCCATCTCCACTCAAAAGGAATAATGCACAGGGATTTAAAACCTGAAAATATCCTTATGGATGTTGATGGCCATGTCATGTTGACTGATTTCGGCTTAGCAAAACAATTTGAAGAAAGTACAAGATCTAATTCAATGTGTGGTACATTAGAGTACATGGCACCTGAAATTATTCTTGGCAAGGGCCATGATAAGGCTGCTGATTGGTGGAGTGTAGGTGTCTTACTGTTTGAGATGCTTACTGGGAAGCCACCCTTCTGTGGTGGGAACCGTGAGAAGATTCAGCAAAAGATAGTGAAAGATAAGATTAAGCTGCCAGGATATTTGTCAAGTGAAGCACACGCACTGTTGAAAGGGCTGCTACAGAAGGAGGCACCAAAGCGGTTGGGTTGTGGAGCTAAAGGGATTTCGGAAATTAAAGGGCACAAGTGGTTCAAACCGATCAATTGGAAGAAGTTAGATGCACGTGAGATCGAACCAAGCTTTAGGCCAGAAGTAGCTGGGAAGTACTGTGTTGCAAACTTTGAGAAGCGCTGGACTGATATGCCTGTTGTTGATTCACCAGCTGCAAGCCCAAATGGTGGAAACCCCTTCAAGGACTTCTCTTATGTCAGACCTACAGCCTCTTTTCTTCAGAATAATAGCCCTGCTTGCTAA 1593 0.4294 MSSTTTGAYLVSCNSGNKNNGLFCWILICLLPKFLGTAFAYINFLLIQAIDRSPSAVRFSGMSVAGMCKPLLFPVNDPGTVTTDHIEMDFSDVFGPLTVEVNNIDNPSFDSVDESSELVYDDPEVIFARSHSLVGPSNCVSQSLKLSKLTIHESDSDNLLELVESVTEEAIEDIKEVINEESLNDEDRSLVEIERVSIDDFEVLKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAEREILTKIEHPFVVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYAAEIVSAVSHLHSKGIMHRDLKPENILMDVDGHVMLTDFGLAKQFEESTRSNSMCGTLEYMAPEIILGKGHDKAADWWSVGVLLFEMLTGKPPFCGGNREKIQQKIVKDKIKLPGYLSSEAHALLKGLLQKEAPKRLGCGAKGISEIKGHKWFKPINWKKLDAREIEPSFRPEVAGKYCVANFEKRWTDMPVVDSPAASPNGGNPFKDFSYVRPTASFLQNNSPAC* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2738 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Psa3g2738 530 PANTHER RIBOSOMAL PROTEIN S6 KINASE 58 528 - -
Psa3g2738 530 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 58 528 - -
Psa3g2738 530 CDD STKc_AGC 207 457 IPR045270 GO:0004674|GO:0005524
Psa3g2738 530 Gene3D Phosphorylase Kinase; domain 1 198 498 - -
Psa3g2738 530 ProSiteProfiles AGC-kinase C-terminal domain profile. 458 525 IPR000961 GO:0004674|GO:0005524|GO:0006468
Psa3g2738 530 Gene3D Transferase(Phosphotransferase) domain 1 281 476 - -
Psa3g2738 530 SUPERFAMILY Protein kinase-like (PK-like) 198 519 IPR011009 -
Psa3g2738 530 ProSiteProfiles Protein kinase domain profile. 201 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2738 530 ProSitePatterns Protein kinases ATP-binding region signature. 207 230 IPR017441 GO:0005524
Psa3g2738 530 Pfam Protein kinase domain 201 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2738 530 SMART serkin_6 201 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2738 530 Pfam Protein kinase C terminal domain 479 515 IPR017892 GO:0004674|GO:0005524|GO:0006468
Psa3g2738 530 SMART pkinase_C_6 458 517 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2738 Psa-Chr3 229861782 229865302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2738 69 527 AGC Kinase Gene Family AT3G08720 69.379 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Psa3g2738 Pkinase 3.9e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2738 K04688 - gmx:100805922 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2738 3 229861782 229865302 Psa3g2738 3 229861782 229865302 ECH